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Protein Overview: LBD30_ARATH

General Information:
Name(s) found: LBD30_ARATH [Swiss-Prot]
Description(s) found:
Found 22 descriptions.
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  • LOB domain-containing protein 30 OS=Arabidopsis thaliana GN=LBD30 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 228 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: organ boundary specification between lateral organs and the meristem [IMP]
    xylem development [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSGNPSSS SGGGGGPCGA CKFLRRKCVA GCIFAPYFDS EQGAAHFAAV HKVFGASNVS  60
   61 KLLHHVPEHK RPDAVVSICF EAQARLRDPI YGCVSHIVSL QQQVVSLQTE LSYLQAHLAT 120
  121 LELPQPQPPQ VPVSSSGSLQ ALSITDLPTI SPSVYDLSSI FEPVMSSTWA MQQQPRPSDH 180
  181 LFGVPSSSNM GGGGELQALA REFIHGGQMP AQPSPGTSGS ASSVIKRE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..145] Pfam 71.823909 No description for PF03195.5 was found. No confident structure predictions are available.
    2 View Details [146..228] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle