| Protein: | LBD16_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 245 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LBD16_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
207.0 | [0..10] | [194..2] |
|
Region A: Residues: [1-146] |
1 11 21 31 41 51
| | | | | |
1 MASSGNGTTA GTGSPCGACK FLRRKCASDC IFAPYFSSEQ GAARFAAIHK VFGASNVSKL 60
61 LLNVPIHDRC EAVVTIAYEA QARLHDPVYG CVSHIFALQQ QVAFLQSQVM QMKAQIAGHQ 120
121 TSAAGDLRHS SESTNQFMTW QQTSVS
|
| Detection Method: |  |
| Confidence: | 68.309804 |
| Match: | PF03195.5 |
| Description: | No description for PF03195.5 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.832 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.793 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.734 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.648 | N/A | N/A | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.611 | N/A | N/A | f.32.1 | a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |
|
Region A: Residues: [147-245] |
1 11 21 31 41 51
| | | | | |
1 PIGSAYSTPY NHHQPYYGHV NPNNPVSPQS SLEESFSNTS SDVTTTANVR ETHHQTGGGV 60
61 YGHDGIGFHE GYPNKKRSVS YCSSDLGELQ ALALRMMKN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
