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View Structure Prediction Details

Protein: KELP_ARATH
Organism: Arabidopsis thaliana
Length: 165 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KELP_ARATH.

Description E-value Query
Range
Subject
Range
gi|26451026, gi|... - gi|30678785|ref|NP_567205.2| zinc knuckle (CCHC-type) family protein [Arabidopsis thaliana], gi|2902...
207.0 [0..1] [165..12]

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Predicted Domain #1
Region A:
Residues: [1-66]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKETKEKIE KTVIEILSES DMKEITEFKV RKLASEKLAI DLSEKSHKAF VRSVVEKFLD  60
   61 EERARE

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.971
Match: 1q1vA
Description: Structure of the Oncoprotein DEK: a putative DNA-binding Domain Related to the Winged Helix Motif
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [67-165]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YENSQVNKEE EDGDKDCGKG NKEFDDDGDL IICRLSDKRR VTIQEFKGKS LVSIREYYKK  60
   61 DGKELPTSKG ISLTDEQWST FKKNMPAIEN AVKKMESRV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.69897
Match: 1pcfA
Description: Transcriptional coactivator PC4 C-terminal domain
Matching Structure (courtesy of the PDB):

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