YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: ILL2_ARATH
Organism: Arabidopsis thaliana
Length: 439 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ILL2_ARATH.

Description E-value Query
Range
Subject
Range
gi|902791 - gi|902791|gb|AAC49016.1| ILL2
339.0 [0..25] [439..25]

Back

Predicted Domain #1
Region A:
Residues: [1-439]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALNKLLSLT FQLLLFLLSV SSESPWIAED TSQIQTKLLE FAKSPEVFDW MVKIRRKIHE  60
   61 NPELGYEELE TSKLIRSELE LIGIKYRYPV AITGVIGYIG TGEPPFVALR ADMDALPIQE 120
  121 GVEWEHKSKI AGKMHACGHD GHVTMLLGAA KILHEHRHHL QGTVVLIFQP AEEGLSGAKK 180
  181 MREEGALKNV EAIFGIHLSA RIPFGKAASR AGSFLAGAGV FEAVITGKGG HAAIPQHTID 240
  241 PVVAASSIVL SLQQLVSRET DPLDSKVVTV SKVNGGNAFN VIPDSITIGG TLRAFTGFTQ 300
  301 LQQRVKEVIT KQAAVHRCNA SVNLTPNGRE PMPPTVNNKD LYKQFKKVVR DLLGQEAFVE 360
  361 AAPVMGSEDF SYFAETIPGH FSLLGMQDET NGYASSHSPL YRINEDVLPY GAAIHASMAV 420
  421 QYLKEKASKG SVSGFHEEL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 92.69897
Match: 1xmbA
Description: X-RAY STRUCTURE OF IAA-AMINOACID HYDROLASE FROM ARABIDOPSIS THALIANA GENE AT5G56660
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 3.0609849976664 bayes_pls_golite062009
peptidase activity 3.04706302825019 bayes_pls_golite062009
catalytic activity 2.3710874246093 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 2.30644893326426 bayes_pls_golite062009
exopeptidase activity 1.25673143627992 bayes_pls_golite062009
carboxypeptidase activity 0.76593160329727 bayes_pls_golite062009
succinyl-diaminopimelate desuccinylase activity 0.0189053170666407 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle