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View Structure Prediction Details

Protein: EIF3F_ARATH
Organism: Arabidopsis thaliana
Length: 293 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EIF3F_ARATH.

Description E-value Query
Range
Subject
Range
gi|114636591 - gi|114636591|ref|XP_508270.2| PREDICTED: hypothetical protein LOC451007 [Pan troglodytes]
318.0 [0..3] [289..87]

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Predicted Domain #1
Region A:
Residues: [1-179]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATSEHTIL QFVSPSSTAS ATTSVLTARI HPLVIFNVCD CFVRRPDSAE RVIGTLLGSI  60
   61 LPDGTVDIRN SYAVPHNESS DQVAVDIDYH HNMLASHLKV NSKETIVGWY STGAGVNGGS 120
  121 SLIHDFYARE VPNPIHLTVD TGFTNGEGTI KAFVSSNLSL GDRQLVAHFQ EIPVDLRMV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.154902
Match: 2o95A
Description: No description for 2o95A was found.

Predicted Domain #2
Region A:
Residues: [180-293]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DAERVGFDVL KATSVDKLPN DLEGMELTME RLLTLINDVY KYVDSVVGGQ IAPDNNIGRF  60
   61 IADAVASLPK LPPQVFDNLV NDSLQDQLLL LYLSSITRTQ LSLAEKLNTA AQML

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.833 N/A N/A a.41.1 Domain of poly(ADP-ribose) polymerase


YRC Informatics Platform - Version 3.0
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