| Protein: | HAT22_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 278 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HAT22_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
140.0 | [0..1] | [278..1] |
|
Region A: Residues: [1-124] |
1 11 21 31 41 51
| | | | | |
1 MGLDDSCNTG LVLGLGLSPT PNNYNHAIKK SSSTVDHRFI RLDPSLTLSL SGESYKIKTG 60
61 AGAGDQICRQ TSSHSGISSF SSGRVKRERE ISGGDGEEEA EETTERVVCS RVSDDHDDEE 120
121 GVSA
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [125-209] |
1 11 21 31 41 51
| | | | | |
1 RKKLRLTKQQ SALLEDNFKL HSTLNPKQKQ ALARQLNLRP RQVEVWFQNR RARTKLKQTE 60
61 VDCEFLKKCC ETLTDENRRL QKELQ
|
| Detection Method: | |
| Confidence: | 24.39794 |
| Match: | 1pufA |
| Description: | Crystal Structure of HoxA9 and Pbx1 homeodomains bound to DNA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [210-278] |
1 11 21 31 41 51
| | | | | |
1 DLKALKLSQP FYMHMPAATL TMCPSCERLG GGGVGGDTTA VDEETAKGAF SIVTKPRFYN 60
61 PFTNPSAAC
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
