| Protein: | P2SAF_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 403 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for P2SAF_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
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292.0 | [0..2] | [402..700] |
|
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289.0 | [0..2] | [402..790] |
|
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285.0 | [0..49] | [402..688] |
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281.0 | [0..48] | [402..1120] |
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278.0 | [0..48] | [402..783] |
|
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277.0 | [0..48] | [402..1048] |
|
Region A: Residues: [1-83] |
1 11 21 31 41 51
| | | | | |
1 MASLQLCDGY LLFKPSVSPR FLSQRISHRL IPKASSSPPP SPSPSSSSSS LSFSRRELLY 60
61 QSAAVSLSLS SIVGPARADE QLS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.750 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.706 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.706 | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.631 | d.68.1 | Translation initiation factor IF3, C-terminal domain |
| View | Download | 0.604 | d.68.6 | DNA-binding protein Sso10b (AlbA) |
| View | Download | 0.524 | a.130.1 | Chorismate mutase II |
| View | Download | 0.519 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.461 | d.15.11 | Doublecortin (DC) |
| View | Download | 0.455 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.412 | d.68.8 | Description not found. |
| View | Download | 0.376 | a.231.1 | Description not found. |
| View | Download | 0.346 | a.74.1 | Cyclin-like |
| View | Download | 0.313 | a.4.1 | Homeodomain-like |
| View | Download | 0.291 | a.4.5 | "Winged helix" DNA-binding domain |
|
Region A: Residues: [84-403] |
1 11 21 31 41 51
| | | | | |
1 EWERVFLPID PGVVLLDIAF VPDEPSRGFL LGTRQTLLET KDGGSTWNPR SIPSAEEEDF 60
61 NYRFNSISFK GKEGWIIGKP AILLYTADAG ENWDRIPLSS QLPGDMVFIK ATEDKSAEMV 120
121 TDEGAIYVTS NRGYNWKAAI QETVSATLNR TVSSGISGAS YYTGTFSAVN RSPDGRYVAV 180
181 SSRGNFFLTW EPGQPYWQPH NRAVARRIQN MGWRADGGLW LLVRGGGLYL SKGTGITEEF 240
241 EEVPVQSRGF GILDVGYRSE EEAWAAGGSG ILLRTRNGGK SWNRDKAADN IAANLYAVKF 300
301 VDDKKGFVLG NDGVLLRYVG
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| Detection Method: | |
| Confidence: | 30.0 |
| Match: | 1trjA |
| Description: | Homology Model of Yeast RACK1 Protein fitted into 11.7A cryo-EM map of Yeast 80S Ribosome |
Matching Structure (courtesy of the PDB): |
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