| Protein: | H11_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 274 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for H11_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
152.0 | [0..5] | [272..32] |
|
Region A: Residues: [1-136] |
1 11 21 31 41 51
| | | | | |
1 MSEVEIENAA TIEGNTAADA PVTDAAVEKK PAAKGRKTKN VKEVKEKKTV AAAPKKRTVS 60
61 SHPTYEEMIK DAIVTLKERT GSSQYAIQKF IEEKRKELPP TFRKLLLLNL KRLVASGKLV 120
121 KVKASFKLPS ASAKAS
|
| Detection Method: |  |
| Confidence: | 6.69897 |
| Match: | 1hstA |
| Description: | Histone H5, globular domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.835523092977445 | bayes_pls_golite062009 |
| transcription regulator activity | 0.4843036104266 | bayes_pls_golite062009 |
| nucleic acid binding | 0.37117756729668 | bayes_pls_golite062009 |
| DNA binding | 0.3118855114645 | bayes_pls_golite062009 |
|
Region A: Residues: [137-274] |
1 11 21 31 41 51
| | | | | |
1 SPKAAAEKSA PAKKKPATVA VTKAKRKVAA ASKAKKTIAV KPKTAAAKKV TAKAKAKPVP 60
61 RATAAATKRK AVDAKPKAKA RPAKAAKTAK VTSPAKKAVA ATKKVATVAT KKKTPVKKVV 120
121 KPKTVKSPAK RASSRVKK
|
| Detection Method: | |
| Confidence: | 1.79 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
