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View Structure Prediction Details

Protein: GSA1_ARATH
Organism: Arabidopsis thaliana
Length: 474 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GSA1_ARATH.

Description E-value Query
Range
Subject
Range
GSA_BRANA - Glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic OS=Brassica napus GN=GSA PE=2 SV=1
433.0 [0..1] [474..1]

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Predicted Domain #1
Region A:
Residues: [1-474]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSATLTGSGT ALGFSCSSKI SKRVSSSPAS NRCCIKMSVS VDEKKKSFSL QKSEEAFNAA  60
   61 KNLMPGGVNS PVRAFKSVGG QPVLIDSVKG SKMWDIDGNE YIDYVGSWGP AIIGHADDEV 120
  121 LAALAETMKK GTSFGAPCLL ENVLAEMVIS AVPSIEMVRF VNSGTEACMG VLRLARAFTN 180
  181 KEKFIKFEGC YHGHANAFLV KAGSGVATLG LPDSPGVPKA ATSDTLTAPY NDLEAVEKLF 240
  241 AAHKGEISAV ILEPVVGNSG FIPPTPEFIN GLRQLTKDNG VLLIFDEVMT GFRLAYGGAQ 300
  301 EYFGITPDLT TLGKIIGGGL PVGAYGGRRD IMEMVAPAGP MYQAGTLSGN PLAMTAGIHT 360
  361 LKRLKQAGTY EYLDKITKEL TNGILEAGKK TGHPMCGGYI SGMFGFFFAE GPVYNFADSK 420
  421 KSDTEKFGRF FRGMLEEGVY FAPSQFEAGF TSLAHTPEDI QLTIAAAERV LSRI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 113.0
Match: 2gsaA
Description: Glutamate-1-semialdehyde aminomutase (aminotransferase)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
4-aminobutyrate transaminase activity 3.63797881096751 bayes_pls_golite062009
catalytic activity 2.29878871754893 bayes_pls_golite062009
5-aminolevulinate synthase activity 1.85905571238884 bayes_pls_golite062009
transferase activity, transferring nitrogenous groups 1.28316822767388 bayes_pls_golite062009
transaminase activity 1.24990480711889 bayes_pls_golite062009
succinate-semialdehyde dehydrogenase binding 0.78144409237642 bayes_pls_golite062009
transferase activity 0.737426388870721 bayes_pls_golite062009
intramolecular transferase activity, transferring amino groups 0.659071155545801 bayes_pls_golite062009
N-succinyltransferase activity 0.52897097514616 bayes_pls_golite062009
L-aspartate:2-oxoglutarate aminotransferase activity 0.509309067503119 bayes_pls_golite062009
transferase activity, transferring acyl groups 0.319452731970428 bayes_pls_golite062009
glycine dehydrogenase (decarboxylating) activity 0.0410208338342797 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor 0.0410208338342797 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle