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View Structure Prediction Details

Protein: GLS1_ARATH, GLTB...
Organism: Arabidopsis thaliana
Length: 1648 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for GLS1_ARATH, GLTB....

Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMQSLSPVP KLLSTTPSSV LSSDKNFFFV DFVGLYCKSK RTRRRLRGDS SSSSRSSSSL  60
   61 SRLSSVRAVI DLERVHGVSE KDLSSPSALR PQVRFFTDIN FTNTQRAKFH PL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [113-1648]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WGSFKQVANL EDILSERGAC GVGFIANLDN IPSHGVVKDA LIALGCMEHR GGCGADNDSG  60
   61 DGSGLMSSIP WDFFNVWAKE QSLAPFDKLH TGVGMIFLPQ DDTFMQEAKQ VIENIFEKEG 120
  121 LQVLGWREVP VNVPIVGKNA RETMPNIQQV FVKIAKEDST DDIERELYIC RKLIERAVAT 180
  181 ESWGTELYFC SLSNQTIVYK GMLRSEALGL FYLDLQNELY ESPFAIYHRR YSTNTSPRWP 240
  241 LAQPMRFLGH NGEINTIQGN LNWMQSREAS LKAAVWNGRE NEIRPFGNPR GSDSANLDSA 300
  301 AEIMIRSGRT PEEALMILVP EAYKNHPTLS VKYPEVVDFY DYYKGQMEAW DGPALLLFSD 360
  361 GKTVGACLDR NGLRPARYWR TSDNFVYVAS EVGVVPVDEA KVTMKGRLGP GMMIAVDLVN 420
  421 GQVYENTEVK KRISSFNPYG KWIKENSRFL KPVNFKSSTV MENEEILRSQ QAFGYSSEDV 480
  481 QMVIESMASQ GKEPTFCMGD DIPLAGLSQR PHMLYDYFKQ RFAQVTNPAI DPLREGLVMS 540
  541 LEVNIGKRGN ILELGPENAS QVILSNPVLN EGALEELMKD QYLKPKVLST YFDIRKGVEG 600
  601 SLQKALYYLC EAADDAVRSG SQLLVLSDRS DRLEPTRPSI PIMLAVGAVH QHLIQNGLRM 660
  661 SASIVADTAQ CFSTHHFACL VGYGASAVCP YLALETCRQW RLSNKTVAFM RNGKIPTVTI 720
  721 EQAQKNYTKA VNAGLLKILS KMGISLLSSY CGAQIFEIYG LGQDVVDLAF TGSVSKISGL 780
  781 TFDELARETL SFWVKAFSED TTKRLENFGF IQFRPGGEYH SNNPEMSKLL HKAVREKSET 840
  841 AYAVYQQHLS NRPVNVLRDL LEFKSDRAPI PVGKVEPAVA IVQRFCTGGM SLGAISRETH 900
  901 EAIAIAMNRI GGKSNSGEGG EDPIRWKPLT DVVDGYSPTL PHLKGLQNGD IATSAIKQVA 960
  961 SGRFGVTPTF LVNADQLEIK VAQGAKPGEG GQLPGKKVSA YIARLRSSKP GVPLISPPPH1020
 1021 HDIYSIEDLA QLIFDLHQIN PNAKVSVKLV AEAGIGTVAS GVAKGNADII QISGHDGGTG1080
 1081 ASPISSIKHA GGPWELGLTE THQTLIANGL RERVILRVDG GLKSGVDVLM AAAMGADEYG1140
 1141 FGSLAMIATG CVMARICHTN NCPVGVASQR EELRARFPGV PGDLVNYFLY VAEEVRGILA1200
 1201 QLGYNSLDDI IGRTELLRPR DISLVKTQHL DLSYLLSSVG TPSLSSTEIR KQEVHTNGPV1260
 1261 LDDDILADPL VIDAIENEKV VEKTVKICNV DRAACGRVAG VIAKKYGDTG FAGQVNLTFL1320
 1321 GSAGQSFGCF LIPGMNIRLI GESNDYVGKG MAGGEIVVTP VEKIGFVPEE ATIVGNTCLY1380
 1381 GATGGQIFAR GKAGERFAVR NSLAEAVVEG TGDHCCEYMT GGCVVVLGKV GRNVAAGMTG1440
 1441 GLAYLLDEDD TLLPKINREI VKIQRVTAPA GELQLKSLIE AHVEKTGSSK GATILNEWEK1500
 1501 YLPLFWQLVP PSEEDTPEAS AAYVRTSTGE VTFQSA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1llwA
Description: Alpha subunit of glutamate synthase, C-terminal domain; Alpha subunit of glutamate synthase, central and FMN domains; Alpha subunit of glutamate synthase, N-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle