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View Structure Prediction Details

Protein: FRI2_ARATH
Organism: Arabidopsis thaliana
Length: 253 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FRI2_ARATH.

Description E-value Query
Range
Subject
Range
gi|21593905 - gi|21593905|gb|AAM65872.1| ferritin subunit, putative [Arabidopsis thaliana]
287.0 [0..1] [253..1]

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Predicted Domain #1
Region A:
Residues: [1-253]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLHKASPALS LLSSGYTGGG NLFPPSRNSS NLLFSPSGSR FSVQAAKGTN TKSLTGVVFE  60
   61 PFEEVKKEME LVPTTPFVSL ARHKFSDDSE SAINDQINVE YNVSYVYHAL YAYFDRDNVG 120
  121 LKGFAKFFND SSLEERGHAE MFMEYQNKRG GRVKLQSILM PVSEFDHEEK GDALHAMELA 180
  181 LSLEKLTNEK LLKLQSVGVK NNDVQLVDFV ESEFLGEQVE AIKKISEYVA QLRRIGKGHG 240
  241 VWHFDQMLLN DEV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.0
Match: 1fhaA
Description: SOLVING THE STRUCTURE OF HUMAN H FERRITIN BY GENETICALLY ENGINEERING INTERMOLECULAR CRYSTAL CONTACTS
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ferric iron binding 5.55100638826026 bayes_pls_golite062009
iron ion binding 3.10225782829614 bayes_pls_golite062009
binding 1.95813969002966 bayes_pls_golite062009
cation binding 1.66873432300081 bayes_pls_golite062009
metal ion binding 1.66873432300081 bayes_pls_golite062009
ion binding 1.66140448750278 bayes_pls_golite062009
transition metal ion binding 1.51474534368635 bayes_pls_golite062009
ribonucleoside-diphosphate reductase activity 0.366005079572569 bayes_pls_golite062009
protein binding 0.30514049100341 bayes_pls_golite062009
oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor 0.289628933165632 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle