| Protein: | FAD6C_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 448 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FAD6C_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
326.0 | [0..1] | [448..1] |
|
|
321.0 | [0..1] | [448..1] |
|
|
309.0 | [0..1] | [418..1] |
|
|
302.0 | [0..1] | [447..1] |
|
|
277.0 | [0..8] | [430..3] |
|
|
276.0 | [0..1] | [447..1] |
|
|
272.0 | [0..5] | [428..1] |
|
|
271.0 | [0..8] | [428..3] |
|
Region A: Residues: [1-105] |
1 11 21 31 41 51
| | | | | |
1 MASRIADSLF AFTGPQQCLP RVPKLAASSA RVSPGVYAVK PIDLLLKGRT HRSRRCVAPV 60
61 KRRIGCIKAV AAPVAPPSAD SAEDREQLAE SYGFRQIGED LPENV
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.575 | d.129.6 | Description not found. |
| View | Download | 0.554 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.543 | d.24.1 | Pili subunits |
| View | Download | 0.536 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.509 | d.50.2 | Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain |
| View | Download | 0.427 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.409 | d.102.1 | Regulatory factor Nef |
| View | Download | 0.402 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.371 | d.1.1 | Microbial ribonucleases |
|
Region A: Residues: [106-215] |
1 11 21 31 41 51
| | | | | |
1 TLKDIMDTLP KEVFEIDDLK ALKSVLISVT SYTLGLFMIA KSPWYLLPLA WAWTGTAITG 60
61 FFVIGHDCAH KSFSKNKLVE DIVGTLAFLP LVYPYEPWRF KHDRHHAKTN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [216-448] |
1 11 21 31 41 51
| | | | | |
1 MLVHDTAWQP VPPEEFESSP VMRKAIIFGY GPIRPWLSIA HWVNWHFNLK KFRASEVNRV 60
61 KISLACVFAF MAVGWPLIVY KVGILGWVKF WLMPWLGYHF WMSTFTMVHH TAPHIPFKPA 120
121 DEWNAAQAQL NGTVHCDYPS WIEILCHDIN VHIPHHISPR IPSYNLRAAH ESIQENWGKY 180
181 TNLATWNWRL MKTIMTVCHV YDKEENYIPF DRLAPEESQP ITFLKKAMPN YTA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.651 | N/A | N/A | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
| View | Download | 0.651 | N/A | N/A | a.78.1 | Fatty acid responsive transcription factor FadR, C-terminal domain |
| View | Download | 0.438 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.385 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.385 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.360 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.352 | N/A | N/A | a.200.1 | Description not found. |
| View | Download | 0.352 | N/A | N/A | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.306 | N/A | N/A | a.24.2 | Aspartate receptor, ligand-binding domain |
