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Protein Overview: FAD6C_ARATH

General Information:
Name(s) found: FAD6C_ARATH [Swiss-Prot]
Description(s) found:
Found 20 descriptions.
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  • Omega-6 fatty acid desaturase, chloroplastic OS=Arabidopsis thaliana GN=FAD6 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 448 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA][NAS]
    chloroplast envelope [IDA]
    Biological Process: photoinhibition [IMP]
    fatty acid biosynthetic process [TAS]
    Molecular Function: omega-6 fatty acid desaturase activity [IGI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRIADSLF AFTGPQQCLP RVPKLAASSA RVSPGVYAVK PIDLLLKGRT HRSRRCVAPV  60
   61 KRRIGCIKAV AAPVAPPSAD SAEDREQLAE SYGFRQIGED LPENVTLKDI MDTLPKEVFE 120
  121 IDDLKALKSV LISVTSYTLG LFMIAKSPWY LLPLAWAWTG TAITGFFVIG HDCAHKSFSK 180
  181 NKLVEDIVGT LAFLPLVYPY EPWRFKHDRH HAKTNMLVHD TAWQPVPPEE FESSPVMRKA 240
  241 IIFGYGPIRP WLSIAHWVNW HFNLKKFRAS EVNRVKISLA CVFAFMAVGW PLIVYKVGIL 300
  301 GWVKFWLMPW LGYHFWMSTF TMVHHTAPHI PFKPADEWNA AQAQLNGTVH CDYPSWIEIL 360
  361 CHDINVHIPH HISPRIPSYN LRAAHESIQE NWGKYTNLAT WNWRLMKTIM TVCHVYDKEE 420
  421 NYIPFDRLAP EESQPITFLK KAMPNYTA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..105] deduced N/A No confident structure predictions are available.
    2 View Details [106..215] MSA 10.783995 View MSA. No confident structure predictions are available.
    3 View Details [216..448] MSA 10.785987 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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