| Protein: | DNLI1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 790 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DNLI1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
709.0 | [0..1] | [790..1] |
|
Region A: Residues: [1-78] |
1 11 21 31 41 51
| | | | | |
1 MLAIRSSNYL RCIPSLCTKT QISQFSSVLI SFSRQISHLR LSSCHRAMSS SRPSAFDALM 60
61 SNARAAAKKK TPQTTNLS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [79-790] |
1 11 21 31 41 51
| | | | | |
1 RSPNKRKIGE TQDANLGKTI VSEGTLPKTE DLLEPVSDSA NPRSDTSSIA EDSKTGAKKA 60
61 KTLSKTDEMK SKIGLLKKKP NDFDPEKMSC WEKGERVPFL FVALAFDLIS NESGRIVITD 120
121 ILCNMLRTVI ATTPEDLVAT VYLSANEIAP AHEGVELGIG ESTIIKAISE AFGRTEDHVK 180
181 KQNTELGDLG LVAKGSRSTQ TMMFKPEPLT VVKVFDTFRQ IAKESGKDSN EKKKNRMKAL 240
241 LVATTDCEPL YLTRLLQAKL RLGFSGQTVL AALGQAAVYN EEHSKPPPNT KSPLEEAAKI 300
301 VKQVFTVLPV YDIIVPALLS GGVWNLPKTC NFTLGVPIGP MLAKPTKGVA EILNKFQDIV 360
361 FTCEYKYDGE RAQIHFMEDG TFEIYSRNAE RNTGKYPDVA LALSRLKKPS VKSFILDCEV 420
421 VAFDREKKKI LPFQILSTRA RKNVNVNDIK VGVCIFAFDM LYLNGQQLIQ ENLKIRREKL 480
481 YESFEEDPGY FQFATAVTSN DIDEIQKFLD ASVDVGCEGL IIKTLDSDAT YEPAKRSNNW 540
541 LKLKKDYMDS IGDSVDLVPI AAFHGRGKRT GVYGAFLLAC YDVDKEEFQS ICKIGTGFSD 600
601 AMLDERSSSL RSQVIATPKQ YYRVGDSLNP DVWFEPTEVW EVKAADLTIS PVHRAATGIV 660
661 DPDKGISLRF PRLLRVREDK KPEEATSSEQ IADLYQAQKH NHPSNEVKGD DD
|
| Detection Method: | |
| Confidence: | 177.0 |
| Match: | 1x9nA |
| Description: | Crystal Structure of Human DNA Ligase I bound to 5'-adenylated, nicked DNA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.62364941193231 | bayes_pls_golite062009 |
| ligase activity | 0.85267344624274 | bayes_pls_golite062009 |
| ligase activity, forming phosphoric ester bonds | 0.81722565837488 | bayes_pls_golite062009 |
| DNA ligase activity | 0.712397444123471 | bayes_pls_golite062009 |
