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View Structure Prediction Details

Protein: COR47_ARATH
Organism: Arabidopsis thaliana
Length: 265 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COR47_ARATH.

Description E-value Query
Range
Subject
Range
gi|388259, gi|99681 - pir||S19226 cold-regulated protein cor47 - Arabidopsis thaliana (fragment), gi|388259|emb|CAA42483....
191.0 [0..1] [265..30]

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Predicted Domain #1
Region A:
Residues: [1-110]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEEYKNNVP EHETPTVATE ESPATTTEVT DRGLFDFLGK KEEEVKPQET TTLESEFDHK  60
   61 AQISEPELAA EHEEVKENKI TLLEELQEKT EEDEENKPSV IEKLHRSNSS 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [111-265]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSSSSDEEGE EKKEKKKKIV EGEEDKKGLV EKIKEKLPGH HDKTAEDDVP VSTTIPVPVS  60
   61 ESVVEHDHPE EEKKGLVEKI KEKLPGHHDE KAEDSPAVTS TPLVVTEHPV EPTTELPVEH 120
  121 PEEKKGILEK IKEKLPGYHA KTTEEEVKKE KESDD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle