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View Structure Prediction Details

Protein: COR47_ARATH
Organism: Arabidopsis thaliana
Length: 265 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COR47_ARATH.

Description E-value Query
Range
Subject
Range
gi|388259, gi|99681 - pir||S19226 cold-regulated protein cor47 - Arabidopsis thaliana (fragment), gi|388259|emb|CAA42483....
191.0 [0..1] [265..30]

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Predicted Domain #1
Region A:
Residues: [1-110]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEEYKNNVP EHETPTVATE ESPATTTEVT DRGLFDFLGK KEEEVKPQET TTLESEFDHK  60
   61 AQISEPELAA EHEEVKENKI TLLEELQEKT EEDEENKPSV IEKLHRSNSS 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.711 a.7.6 Ribosomal protein S20
View Download 0.405 a.4.3 ARID-like
View Download 0.376 a.4.5 "Winged helix" DNA-binding domain
View Download 0.299 a.1.1 Globin-like
View Download 0.238 a.39.1 EF-hand

Predicted Domain #2
Region A:
Residues: [111-265]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSSSSDEEGE EKKEKKKKIV EGEEDKKGLV EKIKEKLPGH HDKTAEDDVP VSTTIPVPVS  60
   61 ESVVEHDHPE EEKKGLVEKI KEKLPGHHDE KAEDSPAVTS TPLVVTEHPV EPTTELPVEH 120
  121 PEEKKGILEK IKEKLPGYHA KTTEEEVKKE KESDD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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