| Protein: | CP20C_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 260 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CP20C_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
318.0 | [0..1] | [260..1] |
|
|
279.0 | [0..82] | [256..301] |
|
|
273.0 | [0..37] | [259..2] |
|
|
268.0 | [0..92] | [257..1] |
|
Region A: Residues: [1-91] |
1 11 21 31 41 51
| | | | | |
1 MASSSSMQMV HTSRSIAQIG FGVKSQLVSA NRTTQSVCFG ARSSGIALSS RLHYASPIKQ 60
61 FSGVYATTKH QRTACVKSMA AEEEEVIEPQ A
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.884 | d.51.1 | Eukaryotic type KH-domain (KH-domain type I) |
| View | Download | 0.863 | d.52.9 | Description not found. |
| View | Download | 0.863 | d.74.1 | Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) |
| View | Download | 0.859 | d.74.3 | RBP11-like subunits of RNA polymerase |
| View | Download | 0.854 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.818 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.768 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.713 | d.74.1 | Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) |
|
Region A: Residues: [92-260] |
1 11 21 31 41 51
| | | | | |
1 KVTNKVYFDV EIGGEVAGRI VMGLFGEVVP KTVENFRALC TGEKKYGYKG SSFHRIIKDF 60
61 MIQGGDFTEG NGTGGISIYG AKFEDENFTL KHTGPGILSM ANAGPNTNGS QFFICTVKTS 120
121 WLDNKHVVFG QVIEGMKLVR TLESQETRAF DVPKKGCRIY ACGELPLDA
|
| Detection Method: | |
| Confidence: | 71.69897 |
| Match: | 1ak4A |
| Description: | Cyclophilin (eukaryotic) |
Matching Structure (courtesy of the PDB): |
|
