| Protein: | COL9_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 372 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COL9_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
221.0 | [0..2] | [370..67] |
|
|
218.0 | [0..2] | [370..11] |
|
|
213.0 | [0..2] | [370..21] |
|
|
209.0 | [0..2] | [367..31] |
|
|
199.0 | [0..2] | [369..9] |
|
|
198.0 | [0..2] | [371..19] |
|
Region A: Residues: [1-158] |
1 11 21 31 41 51
| | | | | |
1 MGYMCDFCGE QRSMVYCRSD AACLCLSCDR SVHSANALSK RHSRTLVCER CNAQPATVRC 60
61 VEERVSLCQN CDWSGHNNSN NNNSSSSSTS PQQHKRQTIS CYSGCPSSSE LASIWSFCLD 120
121 LAGQSICEQE LGMMNIDDDG PTDKKTCNED KKDVLVGS
|
| Detection Method: |  |
| Confidence: | 4.69897 |
| Match: | 2djaA |
| Description: | No description for 2djaA was found. |
|
Region A: Residues: [159-221] |
1 11 21 31 41 51
| | | | | |
1 SSIPETSSVP QGKSSSAKDV GMCEDDFYGN LGMDEVDMAL ENYEELFGTA FNPSEELFGH 60
61 GGI
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.543 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.526 | a.4.1 | Homeodomain-like |
| View | Download | 0.526 | a.4.1 | Homeodomain-like |
| View | Download | 0.513 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.475 | a.4.1 | Homeodomain-like |
| View | Download | 0.454 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.443 | a.60.4 | DNA repair protein Rad51, N-terminal domain |
| View | Download | 0.412 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.396 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.345 | a.60.1 | SAM/Pointed domain |
|
Region A: Residues: [222-372] |
1 11 21 31 41 51
| | | | | |
1 DSLFHKHQTA PEGGNSVQPA GSNDSFMSSK TEPIICFASK PAHSNISFSG VTGESSAGDF 60
61 QECGASSSIQ LSGEPPWYPP TLQDNNACSH SVTRNNAVMR YKEKKKARKF DKRVRYASRK 120
121 ARADVRRRVK GRFVKAGEAY DYDPLTPTRS Y
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
