| Protein: | COBRA_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 456 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COBRA_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
801.0 | [0..1] | [443..1] |
|
|
757.0 | [0..19] | [455..12] |
|
|
757.0 | [0..28] | [456..28] |
|
|
735.0 | [0..29] | [453..23] |
|
|
731.0 | [0..28] | [456..27] |
|
|
726.0 | [0..10] | [452..2] |
|
Region A: Residues: [1-229] |
1 11 21 31 41 51
| | | | | |
1 MESFFSRSTS IVSKLSFLAL WIVFLISSSS FTSTEAYDAL DPEGNITMKW DVMSWTPDGY 60
61 VAVVTMFNFQ KYRHIQSPGW TLGWKWAKKE VIWSMVGAQT TEQGDCSKYK GNIPHCCKKD 120
121 PTVVDLLPGT PYNQQIANCC KGGVMNSWVQ DPATAASSFQ ISVGAAGTTN KTVRVPRNFT 180
181 LMGPGPGYTC GPAKIVRPTK FVTTDTRRTT QAMMTWNITC TYSQFLAQR
|
| Detection Method: |  |
| Confidence: | 103.853872 |
| Match: | PF04833.6 |
| Description: | No description for PF04833.6 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [230-324] |
1 11 21 31 41 51
| | | | | |
1 TPTCCVSLSS FYNETIVGCP TCACGCQNNR TESGACLDPD TPHLASVVSP PTKKGTVLPP 60
61 LVQCTRHMCP IRVHWHVKQN YKEYWRVKIT ITNFN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [325-456] |
1 11 21 31 41 51
| | | | | |
1 YRLNYTQWNL VAQHPNLDNI TQIFSFNYKS LTPYAGLNDT AMLWGVKFYN DFLSEAGPLG 60
61 NVQSEILFRK DQSTFTFEKG WAFPRRIYFN GDNCVMPPPD SYPFLPNGGS RSQFSFVAAV 120
121 LLPLLVFFFF SA
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
