YRC Public Data Repository - Protein Structure Prediction

Protein:	CNX3_ARATH
Organism:	Arabidopsis thaliana
Length:	270 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CNX3_ARATH.

Description	E-value	Query Range	Subject Range
Mocs1-PC - The gene Mocs1 is referred to in FlyBase by the symbol Dmel\Mocs1 (CG33048, FBgn0036122). It is a pr...	277.0	[0..61]	[269..347]
gi\|157767524 - gi\|157767524\|ref\|XP_001667242.1\| Hypothetical protein CBG16084 [Caenorhabditis briggsae AF16] gi\|39596156, gi\|... - gi\|39596156\|emb\|CAE69793.1\| Hypothetical protein CBG16084 [Caenorhabditis briggsae], gi\|187026708\|em...	275.0	[0..58]	[264..350]
gi\|116220225, gi... - gi\|75819546\|ref\|ZP_00749621.1\| COG0315: Molybdenum cofactor biosynthesis enzyme [Vibrio cholerae V51...	272.0	[0..113]	[268..1]
gi\|75816289 - gi\|75816289\|ref\|ZP_00746764.1\| COG0315: Molybdenum cofactor biosynthesis enzyme [Vibrio cholerae V52... gi\|75826331 - gi\|75826331\|ref\|ZP_00755766.1\| COG0315: Molybdenum cofactor biosynthesis enzyme [Vibrio cholerae O39... tr\|C6YBL4\|C6YBL4... - Cyclic pyranopterin monophosphate synthase accessory protein OS=Vibrio cholerae MO10 GN=moaC PE=3 SV... gi\|254848156, gi... - gi\|75829865\|ref\|ZP_00759155.1\| COG0315: Molybdenum cofactor biosynthesis enzyme [Vibrio cholerae MO1...	272.0	[0..113]	[268..1]
MOAC_VIBCH - Molybdenum cofactor biosynthesis protein C OS=Vibrio cholerae GN=moaC PE=3 SV=1 MOAC_VIBCH - Cyclic pyranopterin monophosphate synthase accessory protein OS=Vibrio cholerae serotype O1 (strain ... gi\|229357600, gi... - gi\|229505377\|ref\|ZP_04394887.1\| molybdenum cofactor biosynthesis protein C [Vibrio cholerae BX 33028... gi\|229518074, gi... - gi\|229518074\|ref\|ZP_04407518.1\| molybdenum cofactor biosynthesis protein C [Vibrio cholerae RC9], gi... gi\|121728163, gi... - gi\|121728163\|ref\|ZP_01681198.1\| molybdenum cofactor biosynthesis protein C [Vibrio cholerae V52], gi... gi\|121548388, gi... - gi\|121587385\|ref\|ZP_01677155.1\| molybdenum cofactor biosynthesis protein C [Vibrio cholerae 2740-80]... MOAC_VIBCM - Cyclic pyranopterin monophosphate synthase accessory protein OS=Vibrio cholerae serotype O1 (strain ... gi\|125617739 - gi\|125617739\|gb\|EAZ46294.1\| molybdenum cofactor biosynthesis protein C [Vibrio cholerae MO10] gi\|153800952, gi... - gi\|153800952\|ref\|ZP_01955538.1\| molybdenum cofactor biosynthesis protein C [Vibrio cholerae MZO-3], ... gi\|126520103, gi... - gi\|229510953\|ref\|ZP_04400432.1\| molybdenum cofactor biosynthesis protein C [Vibrio cholerae B33], gi... gi\|229371051, gi... - gi\|229608396\|ref\|YP_002879044.1\| molybdenum cofactor biosynthesis protein C [Vibrio cholerae MJ-1236... gi\|153819305, gi... - gi\|153819305\|ref\|ZP_01971972.1\| molybdenum cofactor biosynthesis protein C [Vibrio cholerae NCTC 845... gi\|197750920, gi... - gi\|254291752\|ref\|ZP_04962538.1\| molybdenum cofactor biosynthesis protein C [Vibrio cholerae AM-19226... MOAC_VIBC3 - Cyclic pyranopterin monophosphate synthase accessory protein OS=Vibrio cholerae serotype O1 (strain ...	271.0	[0..113]	[268..2]
MOAC_ACTPJ - Cyclic pyranopterin monophosphate synthase accessory protein OS=Actinobacillus pleuropneumoniae sero... MOAC_ACTP7 - Cyclic pyranopterin monophosphate synthase accessory protein OS=Actinobacillus pleuropneumoniae sero... gi\|32033742 - gi\|32033742\|ref\|ZP_00134037.1\| COG0315: Molybdenum cofactor biosynthesis enzyme [Actinobacillus pleu... MOAC_ACTP2 - Cyclic pyranopterin monophosphate synthase accessory protein OS=Actinobacillus pleuropneumoniae sero...	271.0	[0..113]	[267..1]
gi\|116216796, gi... - gi\|75823610\|ref\|ZP_00753100.1\| COG0315: Molybdenum cofactor biosynthesis enzyme [Vibrio cholerae RC3...	271.0	[0..113]	[268..1]
gi\|109485692, gi... - gi\|149069513\|gb\|EDM18954.1\| molybdenum cofactor synthesis 1 (predicted), isoform CRA_c [Rattus norve...	270.0	[0..75]	[269..434]
MOAC_VIBVY - Cyclic pyranopterin monophosphate synthase accessory protein OS=Vibrio vulnificus (strain YJ016) GN=...	269.0	[0..113]	[268..1]
gi\|89073363, gi\|... - gi\|89073363\|ref\|ZP_01159887.1\| molybdenum cofactor biosynthesis protein C [Photobacterium sp. SKA34]...	268.0	[0..113]	[268..1]

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Predicted Domain #1

Region A:
Residues: [1-114]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISTLRRAVF LRRFPAVVSP IKRAFSSRID DEFDPQIMNI NELNQEMQSI FGQEPSPDGP  60
   61 GTMDFSELKS SKIEPLRSKN IDFRQQIEYH KSTHSSKNDS QAIEQYAKVA SDMS

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [115-270]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLTHVGIAGE AQMVDVSSKD NSKRTALACC KVILGKRVFD LVLANQMGKG DVLGVAKIAG  60
   61 INGAKQTSSL IPLCHNIALT HVRVDLRLNP EDFSVDIEGE ASCTGKTGVE MEAMTAVSVA 120
  121 GLTVYDMCKA ASKDISITDV RLERKTGGKS GSWSRL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	70.69897
Match:	1ekrA
Description:	Molybdenum cofactor biosynthesis protein C, MoaC
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits