| Protein: | CNGC9_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 733 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CNGC9_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
395.0 | [0..1] | [731..1] |
|
|
377.0 | [0..1] | [731..1] |
|
|
353.0 | [0..1] | [731..1] |
|
|
348.0 | [0..14] | [732..1] |
|
Region A: Residues: [1-100] |
1 11 21 31 41 51
| | | | | |
1 MLDCGKKAVK SQVISGRLEK FVRLDSMDSR YSQTSDTGLN RCTLNLQGPT RGGGAQGNNV 60
61 SSGSFKKGFR KGSKGLWSIG RSIGLGVSRA VFPEDLKVSE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [101-228] |
1 11 21 31 41 51
| | | | | |
1 KKIFDPQDKF LLLCNKLFVT SCILAVSVDP LFLYLPFVKD NEKCIGIDRK LAIIATTLRT 60
61 VIDAFYLFHM ALRFRTAFVA PSSRVFGRGE LVIDPAQIAK RYLQQYFIID FLSVLPLPQI 120
121 VVWRFLYI
|
| Detection Method: | |
| Confidence: | 1.49 |
| Match: | 2a0lA |
| Description: | Crystal structure of KvAP-33H1 Fv complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [229-454] |
1 11 21 31 41 51
| | | | | |
1 SKGASVLATK RALRSIILVQ YIPRFIRLYP LSSELKRTAG VFAETAWAGA AYYLLLYMLA 60
61 SHIVGAIWYL LALERYNGCW TKVCSNSSLD CHRNFLFCGN EKMDGYAAWT TIKDSVLQLN 120
121 CPVNTTDNPP FDFGIYLRAL SSGIVSSKSF VSKYFFCLWW GLQNLSTLGQ GLETSTYPGE 180
181 VIFSIALAIA GLLLFALLIG NMQTYLQSLT IRLEEMRVKR RDSEQW
|
| Detection Method: | |
| Confidence: | 10.154902 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [455-516] |
1 11 21 31 41 51
| | | | | |
1 MHHRMLPPEL RERVRRYDQY KWLETRGVDE ENLVQNLPKD LRRDIKRHLC LALVRRVPLF 60
61 EN
|
| Detection Method: | |
| Confidence: | 2.01 |
| Match: | 2ptmA |
| Description: | No description for 2ptmA was found. |
|
Region A: Residues: [517-644] |
1 11 21 31 41 51
| | | | | |
1 MDERLLDAIC ERLKPCLYTE SSYLVREGDP VNEMLFIIRG RLESVTTDGG RSGFFNRSLL 60
61 KEGDFCGEEL LTWALDPKSG SNLPSSTRTA KALTEVEAFA LIADELKFVA SQFRRLHSRQ 120
121 VQHTFRFY
|
| Detection Method: | |
| Confidence: | 19.39794 |
| Match: | 1wgpA |
| Description: | Solution structure of the cNMP-binding domain from Arabidopsis thaliana cyclic nucleotide-regulated ion channel |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [645-733] |
1 11 21 31 41 51
| | | | | |
1 SQQWRTWAAI FIQAAWRRYV KKKKLEQLRK EEEEGEGSVT SIRATFLASK FAANALRKVH 60
61 KNRIEAKSTI ELVKYQKPSE PDFSADDTS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.923 | f.15.1 | Small-conductance potassium channel |
