| Protein: | CNGC4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 694 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CNGC4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
386.0 | [0..5] | [683..20] |
|
Region A: Residues: [1-78] |
1 11 21 31 41 51
| | | | | |
1 MATEQEFTRA SRFSRDSSSV GYYSEEDNTE EEDEEEEEME EIEEEEEEEE EEDPRIGLTC 60
61 GGRRNGSSNN NKWMMLGR
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [79-211] |
1 11 21 31 41 51
| | | | | |
1 ILDPRSKWVR EWNKVFLLVC ATGLFVDPLF LYTLSVSDTC MCLLVDGWLA LTVTALRSMT 60
61 DLLHLWNIWI QFKIARRWPY PGGDSDGDTN KGGGTRGSTR VAPPYVKKNG FFFDLFVILP 120
121 LPQVVLWVVI PSL
|
| Detection Method: | |
| Confidence: | 1.47 |
| Match: | 2a0lA |
| Description: | Crystal structure of KvAP-33H1 Fv complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [212-436] |
1 11 21 31 41 51
| | | | | |
1 LKRGSVTLVV SVLLVTFLFQ YLPKIYHSIR HLRRNATLSG YIFGTVWWGI ALNMIAYFVA 60
61 AHAAGACWYL LGVQRSAKCL KEQCENTIGC DLRMLSCKEP VYYGTTVMVL DRARLAWAQN 120
121 HQARSVCLDI NTNYTYGAYQ WTIQLVSSES RLEKILFPIF WGLMTLSTFG NLESTTEWSE 180
181 VVFNIIVLTS GLLLVTMLIG NIKVFLHATT SKKQAMHLKM RNIEW
|
| Detection Method: | |
| Confidence: | 32.221849 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [437-499] |
1 11 21 31 41 51
| | | | | |
1 WMKKRHLPIG FRQRVRNYER QRWAAMRGVD ECEMVQNLPE GLRRDIKYHL CLDLVRQVPL 60
61 FQH
|
| Detection Method: | |
| Confidence: | 2.43 |
| Match: | 2ptmA |
| Description: | No description for 2ptmA was found. |
|
Region A: Residues: [500-627] |
1 11 21 31 41 51
| | | | | |
1 MDDLVLENIC DRVKSLIFTK GETIQKEGDA VQRMLFVVRG HLQSSQLLRD GVKSCCMLGP 60
61 GNFSGDELLS WCLRRPFVER LPPSSSTLVT LETTEAFGLD AEDVKYVTQH FRYTFVNEKV 120
121 KRSARYYS
|
| Detection Method: | |
| Confidence: | 12.69897 |
| Match: | 1wgpA |
| Description: | Solution structure of the cNMP-binding domain from Arabidopsis thaliana cyclic nucleotide-regulated ion channel |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [628-694] |
1 11 21 31 41 51
| | | | | |
1 PGWRTWAAVA VQLAWRRYKH RLTLTSLSFI RPRRPLSRCA SLGEDKLRLY AAILTSPKPN 60
61 PDDFDDY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
