| Protein: | CNG18_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 706 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CNG18_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
383.0 | [0..14] | [703..42] |
|
|
369.0 | [0..31] | [703..69] |
|
Region A: Residues: [1-415] |
1 11 21 31 41 51
| | | | | |
1 MNKIRSLRCL LPETITSAST AASNRGSDGS QFSVLWRHQI LDPDSNIVTY WNHVFLITSI 60
61 LALFLDPFYF YVPYVGGPAC LSIDISLAAT VTFFRTVADI FHLLHIFMKF RTAFVARSSR 120
121 VFGRGELVMD SREIAMRYLK TDFLIDVAAM LPLPQLVIWL VIPAATNGTA NHANSTLALI 180
181 VLVQYIPRSF IIFPLNQRII KTTGFIAKTA WAGAAYNLLL YILASHVLGA MWYLSSIGRQ 240
241 FSCWSNVCKK DNALRVLDCL PSFLDCKSLE QPERQYWQNV TQVLSHCDAT SSTTNFKFGM 300
301 FAEAFTTQVA TTDFVSKYLY CLWWGLRNLS SYGQNITTSV YLGETLFCIT ICIFGLILFT 360
361 LLIGNMQSSL QSMSVRVEEW RVKRRDTEEW MRHRQLPPEL QERVRRFVQY KWLAT
|
| Detection Method: |  |
| Confidence: | 50.522879 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [416-585] |
1 11 21 31 41 51
| | | | | |
1 RGVDEESILH SLPTDLRREI QRHLCLSLVR RVPFFSQMDD QLLDAICGCL VSSLSTAGTY 60
61 IFREGDPVNE MLFVIRGQIE SSTTNGGRSG FFNSTTLRPG DFCGEELLTW ALMPNSTLNL 120
121 PSSTRSVRAL SEVEAFALSA EDLKFVAHQF KRLQSKKLQH AFRYYSHQWR
|
| Detection Method: | |
| Confidence: | 16.0 |
| Match: | 1wgpA |
| Description: | Solution structure of the cNMP-binding domain from Arabidopsis thaliana cyclic nucleotide-regulated ion channel |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [586-706] |
1 11 21 31 41 51
| | | | | |
1 AWGACFVQSA WRRYKRRKLA KELSLHESSG YYYPDETGYN EEDEETREYY YGSDEEGGSM 60
61 DNTNLGATIL ASKFAANTRR GTNQKASSSS TGKKDGSSTS LKMPQLFKPD EPDFSIDKED 120
121 V
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
