| Protein: | CNG17_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 720 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CNG17_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
385.0 | [0..1] | [720..1] |
|
|
330.0 | [0..65] | [720..90] |
|
|
329.0 | [0..1] | [719..1] |
|
Region A: Residues: [1-199] |
1 11 21 31 41 51
| | | | | |
1 MELRKDKLLM FYSEGKESKE AKWAVNDPMS KSYKLSLPSA LRPDNLLPGN RLRYTDASKS 60
61 KSSKVSWYKT ILDPGSEIVL KWNWVFIVSC MVALFIDPLY FFVPAIGGDK NYPCARTDTS 120
121 LSILVTFFRT IADLFYLLHI FIKFRTGFIA PNSSTRVFGR GELVMDPKAI AWRYIKSDFI 180
181 IDLIATLPLP QIVIWFVIS
|
| Detection Method: |  |
| Confidence: | 1.51 |
| Match: | 2a0lA |
| Description: | Crystal structure of KvAP-33H1 Fv complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [200-478] |
1 11 21 31 41 51
| | | | | |
1 TTKSYRFDHN NNAIALIVLL QYIPRFYLII PLSSQIVKAT GVVTKTAWAG AAYNLLLYML 60
61 ASHVLGAAWY ILSVDRYTSC WKSRCNGEAG QVNCQLYYLD CDSMYDNNQM TWANVTKVFK 120
121 LCDARNGEFK YGIFGNAITK NVVSSQFFER YFYCLWWGLQ QLSSYGQNLS TTMFMGETTF 180
181 AVLIAIFGLV LFAHLIGNMQ TYLQSLTVRL EEWRLKKRDT EEWMRHRQLP EELRNRVRRY 240
241 EQYKWLATRG VDEEVLLQSL PTDLRRDIQR HLCLDLVRR
|
| Detection Method: | |
| Confidence: | 20.522879 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [479-612] |
1 11 21 31 41 51
| | | | | |
1 VPFFSQMDDQ LLDAICERLV SSLCTEGTYL VREGDLISEM LFIIRGRLES STTNGGRTGF 60
61 FNSIILRPGD FCGEELLSWA LLPKSTLNLP SSTRTVRALV EVEAFALRAE DLKFVANQFR 120
121 RLHSKKLQHT FRFY
|
| Detection Method: | |
| Confidence: | 16.69897 |
| Match: | 1wgpA |
| Description: | Solution structure of the cNMP-binding domain from Arabidopsis thaliana cyclic nucleotide-regulated ion channel |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [613-720] |
1 11 21 31 41 51
| | | | | |
1 SHHWRTWAAC FIQAAWRRYK RRVMENNLTA IESMENEEGE VGEELVVVEE EECVEESPRT 60
61 KMNLGVMVLA SRFAANTRRG VAAQRVKDVE LPRFKKPEEP DFSAEHDD
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.714 | N/A | N/A | a.7.11 | Description not found. |
| View | Download | 0.640 | N/A | N/A | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.602 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.602 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.599 | N/A | N/A | a.63.1 | Apolipophorin-III |
| View | Download | 0.586 | N/A | N/A | a.2.17 | Description not found. |
| View | Download | 0.504 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.467 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.440 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
