| Protein: | CNG15_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 678 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CNG15_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
378.0 | [0..1] | [676..1] |
|
|
370.0 | [0..1] | [678..1] |
|
|
362.0 | [0..5] | [678..36] |
|
Region A: Residues: [1-405] |
1 11 21 31 41 51
| | | | | |
1 MGYGNSRSVR FQEDQEVVHG GESGVKLKFK INGTQINNVK MMSKGKFLKA KVLSRVFSED 60
61 LERVKTKILD PRGQTIRRWN KIFLIACLVS LFVDPLFFFL PVMRNEACIT IGVRLEVVLT 120
121 LIRSLADAFY IAQILIRFRT AYIAPPSRVF GRGELVIDSR KIAWRYLHKS FWIHLVAALP 180
181 LPQVLIWIII PNLRGSPMTN TKNVLRFIII FQYVPRMFLI FPLSRQIIKA TGVVTETAWA 240
241 GAAYNLMLYM LASHVLGACW YLLAVERQEA CWRHACNIEK QICQYRFFEC RRLEDPQRNS 300
301 WFEWSNITTI CKPASKFYEF GIFGDAVTST VTSSKFINKY FYCLWWGLKN LSSLGQNLAT 360
361 STYAGEILFA IIIATLGLVL FALLIGNMQT YLQSTTMRLE EWRIR
|
| Detection Method: |  |
| Confidence: | 47.522879 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [406-460] |
1 11 21 31 41 51
| | | | | |
1 RTDTEQWMHH RQLPPELRQA VRKYDQYKWL ATRGVDEEAL LISLPLDLRR DIKRH
|
| Detection Method: | |
| Confidence: | 19.221849 |
| Match: | 2q0aA |
| Description: | No description for 2q0aA was found. |
|
Region A: Residues: [461-609] |
1 11 21 31 41 51
| | | | | |
1 LCFDLVRRVP LFDQMDERML DAICERLKPA LCTEGTFLVR EGDPVNEMLF IIRGHLDSYT 60
61 TNGGRTGFFN SCLIGPGDFC GEELLTWALD PRPVVILPSS TRTVKAICEV EAFALKAEDL 120
121 QFVASQFRRL HTKQLRHKFR FYSHQWRTW
|
| Detection Method: | |
| Confidence: | 14.30103 |
| Match: | 1wgpA |
| Description: | Solution structure of the cNMP-binding domain from Arabidopsis thaliana cyclic nucleotide-regulated ion channel |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [610-678] |
1 11 21 31 41 51
| | | | | |
1 AACFIQAAWR RHRKRKYKTE LRAKEEFHYR FEAATARLAV NGGKYTRSGS DSGMMSSIQK 60
61 PVEPDFSSE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.630 | a.30.1 | ROP protein |
| View | Download | 0.622 | a.7.14 | Description not found. |
| View | Download | 0.577 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.566 | a.30.1 | ROP protein |
| View | Download | 0.561 | a.2.17 | Description not found. |
| View | Download | 0.553 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.507 | a.2.7 | tRNA-binding arm |
