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View Structure Prediction Details

Protein: CATA1_ARATH
Organism: Arabidopsis thaliana
Length: 492 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CATA1_ARATH.

Description E-value Query
Range
Subject
Range
gi|32526566 - gi|32526566|emb|CAD42908.1| catalase [Prunus persica]
684.0 [0..1] [491..1]

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Predicted Domain #1
Region A:
Residues: [1-492]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPYRVRPSS AHDSPFFTTN SGAPVWNNNS SLTVGTRGPI LLEDYHLLEK LANFDRERIP  60
   61 ERVVHARGAS AKGFFEVTHD ITQLTSADFL RGPGVQTPVI VRFSTVIHER GSPETLRDPR 120
  121 GFAVKFYTRE GNFDLVGNNF PVFFVRDGMK FPDMVHALKP NPKSHIQENW RILDFFSHHP 180
  181 ESLHMFSFLF DDLGIPQDYR HMEGAGVNTY MLINKAGKAH YVKFHWKPTC GIKCLSDEEA 240
  241 IRVGGANHSH ATKDLYDSIA AGNYPQWNLF VQVMDPAHED KFDFDPLDVT KIWPEDILPL 300
  301 QPVGRLVLNK NIDNFFNENE QIAFCPALVV PGIHYSDDKL LQTRIFSYAD SQRHRLGPNY 360
  361 LQLPVNAPKC AHHNNHHDGF MNFMHRDEEV NYFPSRLDPV RHAEKYPTTP IVCSGNREKC 420
  421 FIGKENNFKQ PGERYRSWDS DRQERFVKRF VEALSEPRVT HEIRSIWISY WSQADKSLGQ 480
  481 KLATRLNVRP NF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1tguA
Description: The crystal structure of bovine liver catalase without NADPH
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalase activity 8.51144125131094 bayes_pls_golite062009
peroxidase activity 6.21360523181668 bayes_pls_golite062009
oxidoreductase activity, acting on peroxide as acceptor 6.21360523181668 bayes_pls_golite062009
antioxidant activity 6.04714571701065 bayes_pls_golite062009
oxidoreductase activity 4.53518604474275 bayes_pls_golite062009
catalytic activity 2.21594208202467 bayes_pls_golite062009
protein binding 1.4378207235312 bayes_pls_golite062009
binding 1.3683843096302 bayes_pls_golite062009
hydrolase activity 0.904643040470721 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle