| Protein: | CAP3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 611 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAP3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
444.0 | [0..1] | [611..1] |
|
|
364.0 | [0..1] | [529..1] |
|
|
360.0 | [0..1] | [611..1] |
|
|
356.0 | [0..12] | [593..5] |
|
Region A: Residues: [1-335] |
1 11 21 31 41 51
| | | | | |
1 MGSSKLKRAI GAVKDQTSVG LAKVGGRSSS LTELEIAVVK ATRHDDYPAE DKYIREILCL 60
61 TSYSRNYVSA CVATLSRRLN KTKNWSVALK TLILIQRLLT DGDRAYEQEI FFATRRGTRL 120
121 LNMSDFRDAS QSDSWDYSAF VRTYALYLDE RLDYRMQGRR GKKKSGGGGG GDGDSGEEDD 180
181 HRGTSNDIRS KAIVVKSKPV AEMKTEKIFN RVQHLQQLLD RFLACRPTGN AKNNRVVIVA 240
241 MYPIVKESFQ LYYNITEIMG VLIERFMELD IHDSIKVYEI FCRVSKQFDE LDPFYGWCKN 300
301 MAVARSSEYP ELEKITQKKL DLMDEFIRDK SALAA
|
| Detection Method: |  |
| Confidence: | 86.522879 |
| Match: | 1hf8A |
| Description: | Clathrin assembly lymphoid myeloid leukaemia protein, Calm |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [336-429] |
1 11 21 31 41 51
| | | | | |
1 QTTKSSSKRS NKSEEEESKT EYIQENQEDL NSIKALPAPE QKEEEEEEEK METKKDVEEV 60
61 VSRQDQEGDL LDLTDEAGVT AGTVGDSLAL ALFD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [430-611] |
1 11 21 31 41 51
| | | | | |
1 GVVGTESASG PGWEAFNDNS ADWETDLVRS ATRLSGQKSE LGGGFDTLLL DGMYQYGAVN 60
61 AAVKTSTAYG SSGSASSVAF GSAGSPAASM LALPAPPPTA NGNRNSPVMV DPFAASLEVA 120
121 PPAYVQMNDM EKKQRLLMEE QIMWDQYNRS GRQGHMNFGQ NQQQQYYQLP YSMGPYSYTP 180
181 RY
|
| Detection Method: | |
| Confidence: | 6.045757 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
