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View Structure Prediction Details

Protein: BCA1_ARATH
Organism: Arabidopsis thaliana
Length: 347 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BCA1_ARATH.

Description E-value Query
Range
Subject
Range
gi|15810273, gi|... - gi|6016709|gb|AAF01535.1|AC009325_5 carbonic anhydrase, chloroplast precursor [Arabidopsis thaliana]...
400.0 [0..1] [336..1]
gi|45451864 - gi|45451864|gb|AAS65454.1| chloroplast carbonic anhydrase precursor [Thlaspi caerulescens]
388.0 [0..1] [336..1]
gi|7436820, gi|1... - pir||T09797 carbonate dehydratase (EC 4.2.1.1) 1b - Populus tremula x Populus tremuloides, gi|135451...
384.0 [0..1] [336..1]
gi|20502881 - gi|20502881|gb|AAM22683.1|AF482951_1 carbonic anhydrase [Gossypium hirsutum]
373.0 [0..1] [336..1]
gi|8954289 - gi|8954289|gb|AAD27876.2|AF139464_1 carbonic anhydrase [Vigna radiata]
369.0 [0..1] [336..1]
gi|169057, gi|227784 - gi|227784|prf||1710354A carbonic anhydrase, gi|169057|gb|AAA33652.1| carbonic anhydrase
367.0 [0..1] [336..1]
CAHC_SPIOL - Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2
362.0 [0..1] [336..1]
CAHC_TOBAC - Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1
361.0 [0..1] [336..1]

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Predicted Domain #1
Region A:
Residues: [1-123]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTAPLSGFF LTSLSPSQSS LQKLSLRTSS TVACLPPASS SSSSSSSSSS RSVPTLIRNE  60
   61 PVFAAPAPII APYWSEEMGT EAYDEAIEAL KKLLIEKEEL KTVAAAKVEQ ITAALQTGTS 120
  121 SDK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [124-347]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KAFDPVETIK QGFIKFKKEK YETNPALYGE LAKGQSPKYM VFACSDSRVC PSHVLDFQPG  60
   61 DAFVVRNIAN MVPPFDKVKY GGVGAAIEYA VLHLKVENIV VIGHSACGGI KGLMSFPLDG 120
  121 NNSTDFIEDW VKICLPAKSK VISELGDSAF EDQCGRCERE AVNVSLANLL TYPFVREGLV 180
  181 KGTLALKGGY YDFVKGAFEL WGLEFGLSET SSVKDVATIL HWKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.39794
Match: 1ekjA
Description: beta-carbonic anhydrase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle