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View Structure Prediction Details

Protein: BCA1_ARATH
Organism: Arabidopsis thaliana
Length: 347 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BCA1_ARATH.

Description E-value Query
Range
Subject
Range
gi|15810273, gi|... - gi|6016709|gb|AAF01535.1|AC009325_5 carbonic anhydrase, chloroplast precursor [Arabidopsis thaliana]...
400.0 [0..1] [336..1]
gi|45451864 - gi|45451864|gb|AAS65454.1| chloroplast carbonic anhydrase precursor [Thlaspi caerulescens]
388.0 [0..1] [336..1]
gi|7436820, gi|1... - pir||T09797 carbonate dehydratase (EC 4.2.1.1) 1b - Populus tremula x Populus tremuloides, gi|135451...
384.0 [0..1] [336..1]
gi|20502881 - gi|20502881|gb|AAM22683.1|AF482951_1 carbonic anhydrase [Gossypium hirsutum]
373.0 [0..1] [336..1]
gi|8954289 - gi|8954289|gb|AAD27876.2|AF139464_1 carbonic anhydrase [Vigna radiata]
369.0 [0..1] [336..1]
gi|169057, gi|227784 - gi|227784|prf||1710354A carbonic anhydrase, gi|169057|gb|AAA33652.1| carbonic anhydrase
367.0 [0..1] [336..1]
CAHC_SPIOL - Carbonic anhydrase, chloroplastic OS=Spinacia oleracea PE=1 SV=2
362.0 [0..1] [336..1]
CAHC_TOBAC - Carbonic anhydrase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1
361.0 [0..1] [336..1]

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Predicted Domain #1
Region A:
Residues: [1-123]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTAPLSGFF LTSLSPSQSS LQKLSLRTSS TVACLPPASS SSSSSSSSSS RSVPTLIRNE  60
   61 PVFAAPAPII APYWSEEMGT EAYDEAIEAL KKLLIEKEEL KTVAAAKVEQ ITAALQTGTS 120
  121 SDK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [124-347]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KAFDPVETIK QGFIKFKKEK YETNPALYGE LAKGQSPKYM VFACSDSRVC PSHVLDFQPG  60
   61 DAFVVRNIAN MVPPFDKVKY GGVGAAIEYA VLHLKVENIV VIGHSACGGI KGLMSFPLDG 120
  121 NNSTDFIEDW VKICLPAKSK VISELGDSAF EDQCGRCERE AVNVSLANLL TYPFVREGLV 180
  181 KGTLALKGGY YDFVKGAFEL WGLEFGLSET SSVKDVATIL HWKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.39794
Match: 1ekjA
Description: beta-carbonic anhydrase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle