| Protein: | CK5P1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 640 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CK5P1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
481.0 | [0..26] | [624..3] |
|
|
477.0 | [0..26] | [628..3] |
|
|
468.0 | [0..16] | [634..15] |
|
|
468.0 | [0..23] | [623..37] |
|
|
466.0 | [0..26] | [624..3] |
|
|
466.0 | [0..26] | [624..3] |
|
Region A: Residues: [1-128] |
1 11 21 31 41 51
| | | | | |
1 MASSSLSSLS SILSNPHGCS LCFKASTQRC FALRFLSSKA THASSSSSSA LLPRCRSSTH 60
61 RLTQKPINRK KGFSLNLSRS FSISQIASSG KFDGPSLHQF VSNAQAHASL TTPETESEST 120
121 LDSDIASK
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.648 | a.29.2 | Bromodomain |
| View | Download | 0.648 | a.29.2 | Bromodomain |
| View | Download | 0.597 | a.29.2 | Bromodomain |
| View | Download | 0.597 | a.29.2 | Bromodomain |
| View | Download | 0.523 | a.74.1 | Cyclin-like |
| View | Download | 0.523 | a.74.1 | Cyclin-like |
| View | Download | 0.503 | d.20.1 | UBC-like |
| View | Download | 0.484 | a.1.1 | Globin-like |
| View | Download | 0.444 | a.1.1 | Globin-like |
| View | Download | 0.441 | a.1.1 | Globin-like |
|
Region A: Residues: [129-283] |
1 11 21 31 41 51
| | | | | |
1 GRIYHETYGC QMNINDMEIV LAIMKNSGYK EVVTDPESAE VIFVNTCAIR ENAEQRVWQR 60
61 LNYFWFLKRE WKVNAATGRA KSLKPPKVVV LGCMAERLKD KILDSDKMVD VVCGPDAYRD 120
121 LPRLLEEVDY GQKGINTLLS LEETYADISP VRISE
|
| Detection Method: | |
| Confidence: | 51.49485 |
| Match: | PF00919.11 |
| Description: | No description for PF00919.11 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [284-640] |
1 11 21 31 41 51
| | | | | |
1 NSITAFVSVM RGCNNMCAFC IVPFTRGRER SRPVESIIRE VGELWESGVK EVTLLGQNVN 60
61 SYNDDSADRE SGANWEYSEG FSSRCKVKNM GLRFADLLDR LSVEFPEMRF RFTSPHPKDY 120
121 PDELLYLMRD RHNICNLIHL PAQSGNSRIL EQMRRGYTRE AYLDLVKKIR SIIPDVAITS 180
181 DFITGFCGET EEEHQETLSL VRAVGYDMAY MFAYSMREKT HAHRNYTDDV PEEVKQRRLT 240
241 ELIDAFRETT GPCYDSQVGS TQLVLVEGPN KRAPETELIG KTDKGHRVSF VTKPLFDKAC 300
301 LLDGDDLKRN PGIGDFVEVQ IEKSTRASLF GEALAISKMS LFHDVGVVDA VVASCAS
|
| Detection Method: | |
| Confidence: | 68.221849 |
| Match: | 2qgqA |
| Description: | No description for 2qgqA was found. |
