YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: BCAL2_ARATH
Organism: Arabidopsis thaliana
Length: 559 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BCAL2_ARATH.

Description E-value Query
Range
Subject
Range
gi|28949887 - gi|28949887|emb|CAD70620.1| branched-chain amino acid aminotransferase-like protein [Cicer arietinum...
432.0 [0..1] [540..3]

Back

Predicted Domain #1
Region A:
Residues: [1-244]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVIHAWSAP RSLSTTLMYS FAQRDDIEVL DEPLYAAFLK STGVDRPYKD ELLSKMECDG  60
   61 EKVVKDIIYG PGKKKYRFCK HISKQRLLGL PSELMSEGKH FILIRNPLNI LPSFEKIHPS 120
  121 SFHELGLGEL VSIYSDLCQM GTPPAIIDAD ELQRDPEATL RSLCDDLEIP FQASMLKWEA 180
  181 GPIPEDGLWA PWWYETLHKS TGFSSPQKYP QTFPLMHYDL LEQCLPLYNI LRCHMKHKSS 240
  241 LLSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.154902
Match: 1ls6A
Description: Human SULT1A1 complexed with PAP and p-Nitrophenol
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 1.11744767419239 bayes_pls_golite062009
catalytic activity 1.00104173493322 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [245-559]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TLPPPSLPVP ENAKLLAWVG DEIVPREMAK VSVFDSVVQG GDSVWEGLRI YKGKVFKLEE  60
   61 HLDRLSDSAK ALAFNNVPTR EEIKEAIFRT LITNGMFDNT HIRLSLTRGK KVTSGMSPAF 120
  121 NRYGCTLIVL AEWKPPVYDN DGGIVLVTAT TRRNSPNNLD SKIHHNNLLN NILAKIESNN 180
  181 ANVDDAIMLD KDGFVSETNA TNIFMVKKDR VLTPHADYCL PGITRATVME LVVKENFILE 240
  241 ERRISLSEFH TADEVWTTGT MGELSPVVKI DGRVIGEGKV GPVTRRLQNA YKKLTDGSGV 300
  301 PIPTYQEVKN LEPCV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 85.69897
Match: 1i1kA
Description: Branched-chain aminoacid aminotransferase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
branched-chain-amino-acid transaminase activity 4.24618274748696 bayes_pls_golite062009
catalytic activity 2.42233634542616 bayes_pls_golite062009
transferase activity, transferring nitrogenous groups 2.24372201513675 bayes_pls_golite062009
transaminase activity 2.22194941712055 bayes_pls_golite062009
L-alanine:2-oxoglutarate aminotransferase activity 1.8909983537795 bayes_pls_golite062009
alanine-oxo-acid transaminase activity 1.8909983537795 bayes_pls_golite062009
transferase activity 1.16704669167303 bayes_pls_golite062009
pyridoxal phosphate binding 0.12743884761575 bayes_pls_golite062009
vitamin B6 binding 0.12743884761575 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle