| Protein: | ATHB6_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 311 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATHB6_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
153.0 | [0..1] | [311..1] |
|
Region A: Residues: [1-131] |
1 11 21 31 41 51
| | | | | |
1 MMKRLSSSDS VGGLISLCPT TSTDEQSPRR YGGREFQSML EGYEEEEEAI VEERGHVGLS 60
61 EKKRRLSINQ VKALEKNFEL ENKLEPERKV KLAQELGLQP RQVAVWFQNR RARWKTKQLE 120
121 KDYGVLKTQY D
|
| Detection Method: |  |
| Confidence: | 23.045757 |
| Match: | 1b72A |
| Description: | Homeobox protein hox-b1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [132-311] |
1 11 21 31 41 51
| | | | | |
1 SLRHNFDSLR RDNESLLQEI SKLKTKLNGG GGEEEEEENN AAVTTESDIS VKEEEVSLPE 60
61 KITEAPSSPP QFLEHSDGLN YRSFTDLRDL LPLKAAASSF AAAAGSSDSS DSSALLNEES 120
121 SSNVTVAAPV TVPGGNFFQF VKMEQTEDHE DFLSGEEACE FFSDEQPPSL HWYSTVDHWN 180
181
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
