| Protein: | ATHB5_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 312 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATHB5_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
158.0 | [0..27] | [312..9] |
|
Region A: Residues: [1-178] |
1 11 21 31 41 51
| | | | | |
1 MKRSRGSSDS LSGFLPIRHS TTDKQISPRP TTTGFLYSGA GDYSQMFDAL EDDGSLEDLG 60
61 GVGHASSTAA EKKRRLGVEQ VKALEKNFEI DNKLEPERKV KLAQELGLQP RQVAIWFQNR 120
121 RARWKTKQLE RDYGVLKSNF DALKRNRDSL QRDNDSLLGQ IKELKAKLNV EGVKGIEE
|
| Detection Method: |  |
| Confidence: | 19.522879 |
| Match: | 1b72A |
| Description: | Homeobox protein hox-b1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.334577365229545 | bayes_pls_golite062009 |
| transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
|
Region A: Residues: [179-312] |
1 11 21 31 41 51
| | | | | |
1 NGALKAVEAN QSVMANNEVL ELSHRSPSPP PHIPTDAPTS ELAFEMFSIF PRTENFRDDP 60
61 ADSSDSSAVL NEEYSPNTVE AAGAVAATTV EMSTMGCFSQ FVKMEEHEDL FSGEEACKLF 120
121 ADNEQWYCSD QWNS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
