| Protein: | ATH1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 473 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATH1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
351.0 | [0..1] | [473..1] |
|
|
213.0 | [0..100] | [450..38] |
|
|
213.0 | [0..100] | [450..46] |
|
|
208.0 | [0..109] | [451..1] |
|
|
207.0 | [0..100] | [450..38] |
|
|
200.0 | [0..132] | [469..9] |
|
|
199.0 | [0..132] | [469..9] |
|
|
198.0 | [0..132] | [469..9] |
|
Region A: Residues: [1-190] |
1 11 21 31 41 51
| | | | | |
1 MDNNNNNNTF SSLDNVMTNQ NPLLMDFIPS REDSTSFSTM LPWNTIRSDP LQMGGFDIFN 60
61 SMLTNKYLSS SPRSIDVQDN RNVEFMAPPP HPPPLHPLDH LRHYDDSSNN MWGFEANSEF 120
121 QAFSGVVGPS EPMMSTFGEE DFPFLISNKR NNELSLSLAS DVSDECSEIS LCAATRLASE 180
181 QASCSSKDIS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [191-306] |
1 11 21 31 41 51
| | | | | |
1 NNVVTQGFSQ LIFGSKYLHS VQEILSHFAA YSLDYSSRGT ESGAASSAFT SRFENITEFL 60
61 DGDSNNSEAG FGSTFQRRAL EAKKTHLLDL LQMVDDRYSH CVDEIHTVIS AFHAAT
|
| Detection Method: | |
| Confidence: | 15.09691 |
| Match: | PF07526.2 |
| Description: | No description for PF07526.2 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.727 | N/A | N/A | a.2.14 | Description not found. |
| View | Download | 0.560 | N/A | N/A | a.2.7 | tRNA-binding arm |
| View | Download | 0.560 | N/A | N/A | a.2.7 | tRNA-binding arm |
| View | Download | 0.522 | N/A | N/A | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.445 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.443 | N/A | N/A | a.25.4 | Description not found. |
| View | Download | 0.380 | N/A | N/A | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.366 | N/A | N/A | a.6.1 | Putative DNA-binding domain |
| View | Download | 0.326 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.325 | N/A | N/A | a.24.5 | TMV-like viral coat proteins |
|
Region A: Residues: [307-473] |
1 11 21 31 41 51
| | | | | |
1 ELDPQLHTRF ALQTVSFLYK NLRERICKKI ISMGSVLERG KDKTQETSMF HQHCLLQQLK 60
61 RKNHQIWRPQ RGLPEKSVSV LRNWMFQNFL HPYPKDSEKH LLAIRSGLTR SQVSNWFINA 120
121 RVRLWKPMIE EMYAEMNKRK LNNSHIQPNG PTLRMPKSVM MSQAMHK
|
| Detection Method: | |
| Confidence: | 12.522879 |
| Match: | 2d5vA |
| Description: | No description for 2d5vA was found. |
