| Protein: | ARFE_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 902 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARFE_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
660.0 | [0..1] | [902..1] |
|
|
539.0 | [0..5] | [902..3] |
|
|
537.0 | [0..46] | [900..1] |
|
|
536.0 | [0..5] | [902..1] |
|
|
534.0 | [0..30] | [900..4] |
|
Region A: Residues: [1-139] |
1 11 21 31 41 51
| | | | | |
1 MMASLSCVED KMKTSCLVNG GGTITTTTSQ STLLEEMKLL KDQSGTRKPV INSELWHACA 60
61 GPLVCLPQVG SLVYYFSQGH SEQVAVSTRR SATTQVPNYP NLPSQLMCQV HNVTLHADKD 120
121 SDEIYAQMSL QPVHSERDV
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [140-335] |
1 11 21 31 41 51
| | | | | |
1 FPVPDFGMLR GSKHPTEFFC KTLTASDTST HGGFSVPRRA AEKLFPPLDY SAQPPTQELV 60
61 VRDLHENTWT FRHIYRGQPK RHLLTTGWSL FVGSKRLRAG DSVLFIRDEK SQLMVGVRRA 120
121 NRQQTALPSS VLSADSMHIG VLAAAAHATA NRTPFLIFYN PRACPAEFVI PLAKYRKAIC 180
181 GSQLSVGMRF GMMFET
|
| Detection Method: | |
| Confidence: | 33.221849 |
| Match: | 1widA |
| Description: | Solution Structure of the B3 DNA-Binding Domain of RAV1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [336-406] |
1 11 21 31 41 51
| | | | | |
1 EDSGKRRYMG TIVGISDLDP LRWPGSKWRN LQVEWDEPGC NDKPTRVSPW DIETPESLFI 60
61 FPSLTSGLKR Q
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [407-684] |
1 11 21 31 41 51
| | | | | |
1 LHPSYFAGET EWGSLIKRPL IRVPDSANGI MPYASFPSMA SEQLMKMMMR PHNNQNVPSF 60
61 MSEMQQNIVM GNGGLLGDMK MQQPLMMNQK SEMVQPQNKL TVNPSASNTS GQEQNLSQSM 120
121 SAPAKPENST LSGCSSGRVQ HGLEQSMEQA SQVTTSTVCN EEKVNQLLQK PGASSPVQAD 180
181 QCLDITHQIY QPQSDPINGF SFLETDELTS QVSSFQSLAG SYKQPFILSS QDSSAVVLPD 240
241 STNSPLFHDV WDTQLNGLKF DQFSPLMQQD LYASQNIC
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [685-771] |
1 11 21 31 41 51
| | | | | |
1 MSNSTTSNIL DPPLSNTVLD DFCAIKDTDF QNHPSGCLVG NNNTSFAQDV QSQITSASFA 60
61 DSQAFSRQDF PDNSGGTGTS SSNVDFD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [772-902] |
1 11 21 31 41 51
| | | | | |
1 DCSLRQNSKG SSWQKIATPR VRTYTKVQKT GSVGRSIDVT SFKDYEELKS AIECMFGLEG 60
61 LLTHPQSSGW KLVYVDYESD VLLVGDDPWE EFVGCVRCIR ILSPTEVQQM SEEGMKLLNS 120
121 AGINDLKTSV S
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
