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View Structure Prediction Details

Protein: ALG6_ARATH
Organism: Arabidopsis thaliana
Length: 533 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALG6_ARATH.

Description E-value Query
Range
Subject
Range
ALG6_RAT - Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase OS=Rattus norvegicus GN=Alg6 PE=2 S...
517.0 [0..27] [529..1]

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Predicted Domain #1
Region A:
Residues: [1-95]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKKKPAKHS GEDDITIPVS PQTGSSIDTW WWLTHKGTTT SFLCISLFAL LIRSAVTMYP  60
   61 YSGAGIPPKF GDFEAQRHWM EITTNLPVID WYRNG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [96-303]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TYNDLTYWGL DYPPLTAYQS YIHGIFLRFF NPESVALLSS RGHESYLGKL LMRWTVLSSD  60
   61 AFIFFPAALF FVLVYHRNRT RGGKSEVAWH IAMILLNPCL ILIDHGHFQY NCISLGLTVG 120
  121 AIAAVLCESE VLTCVLFSLA LSHKQMSAYF APAFFSHLLG KCLRRKSPIL SVIKLGIAVI 180
  181 VTFVIFWWPY VHSLDDFLMV LSRLAPFE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [304-420]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RGIYEDYVAN FWCTTSILIK WKNLFTTQSL KSISLAATIL ASLPSMVQQI LSPSNEGFLY  60
   61 GLLNSSMAFY LFSFQVHEKS ILMPFLSATL LALKLPDHFS HLTYYALFSM FPLLCRD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [421-533]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLLIPYLTLS FLFTVIYHSP GNHHAIQKTD VSFFSFKNFP GYVFLLRTHF FISVVLHVLY  60
   61 LTIKPPQKYP FLFEALIMIL CFSYFIMFAF YTNYTQWTLS SHFGSSDKEK KQI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle