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View Structure Prediction Details

Protein: ALG6_ARATH
Organism: Arabidopsis thaliana
Length: 533 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALG6_ARATH.

Description E-value Query
Range
Subject
Range
ALG6_RAT - Dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase OS=Rattus norvegicus GN=Alg6 PE=2 S...
517.0 [0..27] [529..1]

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Predicted Domain #1
Region A:
Residues: [1-95]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKKKPAKHS GEDDITIPVS PQTGSSIDTW WWLTHKGTTT SFLCISLFAL LIRSAVTMYP  60
   61 YSGAGIPPKF GDFEAQRHWM EITTNLPVID WYRNG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [96-303]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TYNDLTYWGL DYPPLTAYQS YIHGIFLRFF NPESVALLSS RGHESYLGKL LMRWTVLSSD  60
   61 AFIFFPAALF FVLVYHRNRT RGGKSEVAWH IAMILLNPCL ILIDHGHFQY NCISLGLTVG 120
  121 AIAAVLCESE VLTCVLFSLA LSHKQMSAYF APAFFSHLLG KCLRRKSPIL SVIKLGIAVI 180
  181 VTFVIFWWPY VHSLDDFLMV LSRLAPFE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [304-420]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RGIYEDYVAN FWCTTSILIK WKNLFTTQSL KSISLAATIL ASLPSMVQQI LSPSNEGFLY  60
   61 GLLNSSMAFY LFSFQVHEKS ILMPFLSATL LALKLPDHFS HLTYYALFSM FPLLCRD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [421-533]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLLIPYLTLS FLFTVIYHSP GNHHAIQKTD VSFFSFKNFP GYVFLLRTHF FISVVLHVLY  60
   61 LTIKPPQKYP FLFEALIMIL CFSYFIMFAF YTNYTQWTLS SHFGSSDKEK KQI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle