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View Structure Prediction Details

Protein: 3MG_ARATH
Organism: Arabidopsis thaliana
Length: 254 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for 3MG_ARATH.

Description E-value Query
Range
Subject
Range
gi|110743664, gi... - gi|110743845|dbj|BAE99757.1| hypothetical protein [Arabidopsis thaliana], gi|110743664|dbj|BAE99669....
325.0 [0..14] [254..1]

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Predicted Domain #1
Region A:
Residues: [1-254]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTPARRSKR VNQEESETNV TTRVVLRTRK TNCSKTRAAR VRPDYPLTRT TSESEMKLMP  60
   61 PEFFQIDALD LAPRLLGKFM RRDNVVLRIT EVEAYRPNDS ACHGRFGVTP RTAPVFGPGG 120
  121 HAYVYLCYGL HMMLNIVADK EGVGAAVLIR SCSPVSGMET IQERRGLKTD KPVLLNGPGK 180
  181 VGQALGLSTE WSHHPLYSPG GLELLDGGED VEKVMVGPRV GIDYALPEHV NALWRFAVAD 240
  241 TPWISAPKNT LKPL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.522879
Match: 1f4rA
Description: 3-methyladenine DNA glycosylase (AAG, ANPG, MPG)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
DNA N-glycosylase activity 2.82903690025185 bayes_pls_golite062009
hydrolase activity, hydrolyzing N-glycosyl compounds 2.47858881161269 bayes_pls_golite062009
alkylbase DNA N-glycosylase activity 1.38670970810513 bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds 1.31512600331117 bayes_pls_golite062009
catalytic activity 1.11092890710142 bayes_pls_golite062009
hydrolase activity 0.47210507650617 bayes_pls_golite062009
binding 0.0371188365761971 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle