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View Structure Prediction Details

Protein: YKCC_BACSU
Organism: Bacillus subtilis
Length: 323 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YKCC_BACSU.

Description E-value Query
Range
Subject
Range
gi|67923617, gi|... - gi|67923617|ref|ZP_00517088.1| Glycosyl transferase, family 2 [Crocosphaera watsonii WH 8501], gi|67...
267.0 [0..7] [314..10]

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Predicted Domain #1
Region A:
Residues: [1-323]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRHIQYSIV VPVYNEELVI HETYQRLKEV MDQTKENYEL LFVNDGSKDR SIEILREHSL  60
   61 IDPRVKIIDF SRNFGHQIAI TAGMDYAQGN AIVVIDADLQ DPPELILEMI EKWKEGYEVV 120
  121 YAVRTKRKGE TFFKKQTAAM FYRLLSGMTD IDIPIDTGDF RLMDRKVCDE MKRLKEKNPF 180
  181 VRGLVSWVGS KQTAVEYVRD ERLAGETKYP LKKMLKLSMD GITTFSHKPL KLASYAGILM 240
  241 SGTGFLYMFI VLYLKLFTDS TITGWSSLIV IQLLFSGIVL LILGVIGEYI GRIYDEAKDR 300
  301 PLYIVQKSYG IENKRLYRDQ HMS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.0
Match: 1xhbA
Description: The Crystal Structure of UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferase-T1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transferase activity, transferring hexosyl groups 2.25735925472076 bayes_pls_golite062009
catalytic activity 1.88676710996045 bayes_pls_golite062009
UDP-glycosyltransferase activity 1.78834682378184 bayes_pls_golite062009
transferase activity 1.39859835180302 bayes_pls_golite062009
cytidylyltransferase activity 1.14240569193314 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 0.897978517422275 bayes_pls_golite062009
nucleotidyltransferase activity 0.83784639848251 bayes_pls_golite062009
acetylgalactosaminyltransferase activity 0.767787396530785 bayes_pls_golite062009
polypeptide N-acetylgalactosaminyltransferase activity 0.490017972387603 bayes_pls_golite062009
UDP-N-acetylglucosamine diphosphorylase activity 0.412018910498896 bayes_pls_golite062009
uridylyltransferase activity 0.321928989676507 bayes_pls_golite062009
glucuronosyltransferase activity 0.287421645469793 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.27527211761648 bayes_pls_golite062009
mannose-phosphate guanylyltransferase activity 0.2363835251362 bayes_pls_golite062009
mannosyltransferase activity 0.122810529884819 bayes_pls_golite062009
guanylyltransferase activity 0.0539392112504681 bayes_pls_golite062009
binding 0.032336059877822 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle