| Protein: | RIBBA_BACSU, RIB... |
| Organism: | Bacillus subtilis |
| Length: | 398 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RIBBA_BACSU, RIB....
| Description | E-value | Query Range |
Subject Range |
|
|
591.0 | [0..2] | [396..9] |
|
Region A: Residues: [1-200] |
1 11 21 31 41 51
| | | | | |
1 MFHPIEEALD ALKKGEVIIV VDDEDRENEG DFVALAEHAT PEVINFMATH GRGLICTPLS 60
61 EEIADRLDLH PMVEHNTDSH HTAFTVSIDH RETKTGISAQ ERSFTVQALL DSKSVPSDFQ 120
121 RPGHIFPLIA KKGGVLKRAG HTEAAVDLAE ACGSPGAGVI CEIMNEDGTM ARVPELIEIA 180
181 KKHQLKMITI KDLIQYRYNL
|
| Detection Method: |  |
| Confidence: | 74.522879 |
| Match: | 1iezA |
| Description: | 3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | 7.56167968780416 | bayes_pls_golite062009 |
| GTP cyclohydrolase activity | 2.51581618679202 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | 1.92717548101547 | bayes_pls_golite062009 |
| cyclohydrolase activity | 1.48770406828775 | bayes_pls_golite062009 |
| binding | 1.05088380360844 | bayes_pls_golite062009 |
| nucleic acid binding | 0.637633326908211 | bayes_pls_golite062009 |
| catalytic activity | 0.343636936190038 | bayes_pls_golite062009 |
| protein binding | 0.291469273637145 | bayes_pls_golite062009 |
| DNA binding | 0.21448652890147 | bayes_pls_golite062009 |
|
Region A: Residues: [201-398] |
1 11 21 31 41 51
| | | | | |
1 TTLVEREVDI TLPTDFGTFK VYGYTNEVDG KEHVAFVMGD VPFGEEPVLV RVHSECLTGD 60
61 VFGSHRCDCG PQLHAALNQI AAEGRGVLLY LRQEGRGIGL INKLKAYKLQ EQGYDTVEAN 120
121 EALGFLPDLR NYGIGAQILR DLGVRNMKLL TNNPRKIAGL EGYGLSISER VPLQMEAKEH 180
181 NKKYLQTKMN KLGHLLHF
|
| Detection Method: | |
| Confidence: | 72.221849 |
| Match: | 2bz0A |
| Description: | Crystal Structure of E. coli GTP cyclohydrolase II in complex with GTP analogue, GMPcPP, and Zinc |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| GTP cyclohydrolase activity | 4.36867535385235 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | 3.7708397651039 | bayes_pls_golite062009 |
| cyclohydrolase activity | 3.33696578638249 | bayes_pls_golite062009 |
| catalytic activity | 1.40764037338379 | bayes_pls_golite062009 |
| binding | 1.32693434551075 | bayes_pls_golite062009 |
| protein binding | 0.418779722842637 | bayes_pls_golite062009 |
