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View Structure Prediction Details

Protein: ILVD_BACSU
Organism: Bacillus subtilis
Length: 558 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ILVD_BACSU.

Description E-value Query
Range
Subject
Range
ILVD_GEOKA - Dihydroxy-acid dehydratase OS=Geobacillus kaustophilus (strain HTA426) GN=ilvD PE=3 SV=1
ILVD_GEOKA - Dihydroxy-acid dehydratase OS=Geobacillus kaustophilus GN=ilvD PE=3 SV=1
846.0 [0..1] [558..1]

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Predicted Domain #1
Region A:
Residues: [1-558]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAELRSNMIT QGIDRAPHRS LLRAAGVKEE DFGKPFIAVC NSYIDIVPGH VHLQEFGKIV  60
   61 KEAIREAGGV PFEFNTIGVD DGIAMGHIGM RYSLPSREII ADSVETVVSA HWFDGMVCIP 120
  121 NCDKITPGML MAAMRINIPT IFVSGGPMAA GRTSYGRKIS LSSVFEGVGA YQAGKINENE 180
  181 LQELEQFGCP TCGSCSGMFT ANSMNCLSEA LGLALPGNGT ILATSPERKE FVRKSAAQLM 240
  241 ETIRKDIKPR DIVTVKAIDN AFALDMALGG STNTVLHTLA LANEAGVEYS LERINEVAER 300
  301 VPHLAKLAPA SDVFIEDLHE AGGVSAALNE LSKKEGALHL DALTVTGKTL GETIAGHEVK 360
  361 DYDVIHPLDQ PFTEKGGLAV LFGNLAPDGA IIKTGGVQNG ITRHEGPAVV FDSQDEALDG 420
  421 IINRKVKEGD VVIIRYEGPK GGPGMPEMLA PTSQIVGMGL GPKVALITDG RFSGASRGLS 480
  481 IGHVSPEAAE GGPLAFVENG DHIIVDIEKR ILDVQVPEEE WEKRKANWKG FEPKVKTGYL 540
  541 ARYSKLVTSA NTGGIMKI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 168.0
Match: 2gp4A
Description: No description for 2gp4A was found.

Predicted functions:

Term Confidence Notes
3-isopropylmalate dehydratase activity 5.35660492472618 bayes_pls_golite062009
catalytic activity 1.61959327305722 bayes_pls_golite062009
carbon-oxygen lyase activity 1.16841092671386 bayes_pls_golite062009
hydro-lyase activity 1.13002130445077 bayes_pls_golite062009
lyase activity 1.11228159918123 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle