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View Structure Prediction Details

Protein: GSA_BACSU
Organism: Bacillus subtilis
Length: 430 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GSA_BACSU.

Description E-value Query
Range
Subject
Range
GSA_HAES1 - Glutamate-1-semialdehyde 2,1-aminomutase OS=Haemophilus somnus (strain 129Pt) GN=hemL PE=3 SV=1
421.0 [0..4] [427..1]

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Predicted Domain #1
Region A:
Residues: [1-430]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSYEKSKTA FKEAQKLMPG GVNSPVRAFK SVDMDPIFME RGKGSKIFDI DGNEYIDYVL  60
   61 SWGPLILGHT NDRVVESLKK VAEYGTSFGA PTEVENELAK LVIDRVPSVE IVRMVSSGTE 120
  121 ATMSALRLAR GYTGRNKILK FEGCYHGHGD SLLIKAGSGV ATLGLPDSPG VPEGIAKNTI 180
  181 TVPYNDLESV KLAFQQFGED IAGVIVEPVA GNMGVVPPQE GFLQGLRDIT EQYGSLLIFD 240
  241 EVMTGFRVDY NCAQGYFGVT PDLTCLGKVI GGGLPVGAYG GKAEIMEQIA PSGPIYQAGT 300
  301 LSGNPLAMTA GLETLKQLTP ESYKNFIKKG DRLEEGISKT AGAHGIPHTF NRAGSMIGFF 360
  361 FTNEPVINYE TAKSSDLKLF ASYYKGMANE GVFLPPSQFE GLFLSTAHTD EDIENTIQAA 420
  421 EKVFAEISRR 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 111.0
Match: 2gsaA
Description: Glutamate-1-semialdehyde aminomutase (aminotransferase)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
4-aminobutyrate transaminase activity 2.57134139707548 bayes_pls_golite062009
catalytic activity 2.29878871754893 bayes_pls_golite062009
adenosylmethionine-8-amino-7-oxononanoate transaminase activity 1.74778109525713 bayes_pls_golite062009
N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity 1.4383564662931 bayes_pls_golite062009
transferase activity, transferring nitrogenous groups 1.28316822767388 bayes_pls_golite062009
L-aspartate:2-oxoglutarate aminotransferase activity 1.27059944776392 bayes_pls_golite062009
transaminase activity 1.24990480711889 bayes_pls_golite062009
glycine dehydrogenase (decarboxylating) activity 0.850477657469373 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor 0.850477657469373 bayes_pls_golite062009
transferase activity 0.737426388870721 bayes_pls_golite062009
carbon-sulfur lyase activity 0.698312655247044 bayes_pls_golite062009
intramolecular transferase activity, transferring amino groups 0.659071155545801 bayes_pls_golite062009
5-aminolevulinate synthase activity 0.604706675699046 bayes_pls_golite062009
ornithine-oxo-acid transaminase activity 0.249161992044871 bayes_pls_golite062009
kynureninase activity 0.242752584041108 bayes_pls_golite062009
cystathionine beta-lyase activity 0.15938456446406 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle