YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: tag-93
Organism: Caenorhabditis elegans
Length: 367 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tag-93.

Description E-value Query
Range
Subject
Range
gi|73963080 - gi|73963080|ref|XP_852144.1| PREDICTED: similar to protein phosphatase 1A isoform 1 isoform 3 [Canis...
307.0 [0..2] [367..20]

Back

Predicted Domain #1
Region A:
Residues: [1-367]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKEIYGMSS MQGWRICMED SHIAEAIMSQ SSPYKDWSFF AVFDGHAGHH IANRASSQLL  60
   61 EHLISSEEFR EMTKTLEENN GVLTDSTLKL LEKGIKKGFL SFDEISKTSN DISKSGCTAV 120
  121 CAIVTPTHFI IGNLGDSRAV VAGKNEIFGT EDHKPYLEKE RKRIEGAGGS VMIQRINGSL 180
  181 AVSRAFGDYE YKDDPRLPAD QQLVSPEPDV YIRERNLEND QFMVVACDGI YDVMTNEELA 240
  241 EFVKDRLSVH SDLREVCDDV LDECLVKGSR DNMTMVVVCF PAAPEVNIHR KEAEEAWVSR 300
  301 VKTVINQFLD EAVAAEDFKQ EEDMVTLKSI LDKVTANGLL PTDLRVPEHT VTTLAQKILT 360
  361 QRDIKHV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 80.522879
Match: 1a6qA
Description: CRYSTAL STRUCTURE OF THE PROTEIN SERINE/THREONINE PHOSPHATASE 2C AT 2 A RESOLUTION
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoprotein phosphatase activity 7.29765002420868 bayes_pls_golite062009
phosphatase activity 6.84540130415879 bayes_pls_golite062009
phosphoric ester hydrolase activity 6.63839066304808 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 5.76293366458633 bayes_pls_golite062009
protein serine/threonine phosphatase activity 5.66354576593165 bayes_pls_golite062009
hydrolase activity 2.5631136269171 bayes_pls_golite062009
binding 1.74689317666387 bayes_pls_golite062009
catalytic activity 1.53401212718168 bayes_pls_golite062009
protein binding 1.47578617076714 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle