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View Structure Prediction Details

Protein: CE36125
Organism: Caenorhabditis elegans
Length: 562 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36125.

Description E-value Query
Range
Subject
Range
gi|55741614, gi|... - gi|55741614|ref|NP_001006205.1| acyl-Coenzyme A oxidase 1 [Gallus gallus], gi|53127808|emb|CAG31233....
gi|55741614 - ref|NP_001006205.1| similar to acyl-CoA oxidase type 2 [Gallus gallus]
512.0 [0..1] [556..101]

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Predicted Domain #1
Region A:
Residues: [1-562]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALHGVMFIP ALNAQASDEQ QAKWLIRALR REIIGTYAQT EMGHGTNLQN LETTATYDIG  60
   61 TQEFVLHTPK ITALKWWPGN LGKSSNYAVV VAHMYIKGKN FGPHTFMVPL RDEKTHKPLP 120
  121 GITIGDIGPK MAYNIVDNGF LGFNNYRIPR TNLLMRHTKV EADGTYIKPP HAKINYSAMV 180
  181 HVRSYMLTGQ AIMLSYALNI ATRYSAVRRQ GQIDKNEPEV KVLEYQTQQH RLFPFIARAY 240
  241 AFQFAGAETV KLYERVLKEM KSGNVSLMAD LHALTSGLKS VVTHQTGEGI EQARMACGGH 300
  301 GYSMASYISE IYGVAIGGCT YEGENMVMLL QLARYLVKSA ALVKSGKASQ LGPLVAYLGA 360
  361 RSEPTSLIDR VPNGGITEYI KTFQHIAKRQ TLKAANKFFG LMENGEKREI AWNKSSVELN 420
  421 RASRLHTRLF IVEAFARRVN EIGDITIKEA LSDLLHLHVN YELLDVATYA LEDGFMSSTQ 480
  481 LDYVRDQLYF YLQKIRPNAV SLLDSWEFSD RELRSVLGRR DGHVYENLFK WAKESPLNKT 540
  541 DVLPSVDTYL KPMMEKARQS KL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 145.0
Match: 1is2A
Description: Peroxisomal acyl-CoA oxidase-II, domains 3 and 4; Peroxisomal acyl-CoA oxidase-II, domains 1 and 2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
acyl-CoA oxidase activity 7.85164875699474 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors 7.69964776555327 bayes_pls_golite062009
acyl-CoA dehydrogenase activity 6.0252876667118 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor 5.50948952617422 bayes_pls_golite062009
palmitoyl-CoA oxidase activity 5.41720462605663 bayes_pls_golite062009
oxidoreductase activity 3.99827953439804 bayes_pls_golite062009
catalytic activity 2.41506805547596 bayes_pls_golite062009
pristanoyl-CoA oxidase activity 2.26651221125135 bayes_pls_golite062009
long-chain-acyl-CoA dehydrogenase activity 0.13696326544237 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle