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View Structure Prediction Details

Protein: CE35897
Organism: Caenorhabditis elegans
Length: 794 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE35897.

Description E-value Query
Range
Subject
Range
CE18084 - GMP synthase status:Partially_confirmed UniProt:Q09580 protein_id:CAA87052.1
667.0 [0..1] [794..1]

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Predicted Domain #1
Region A:
Residues: [1-107]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFSSQVYPC SPKRVKIGAR QSKRHCRNLP SELQRAKRTK AVSKVSEHTM KRSSSMLDIN  60
   61 EDSQHSTNKA PPPKKAPEDR FDSANMNASG SHVTLVENLP VEKVSSG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.522879
Match: 1bxrB
Description: Carbamoyl phosphate synthetase, small subunit N-terminal domain; Carbamoyl phosphate synthetase, small subunit C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [108-664]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ERIAILDFGA QYGKVIDRRV RELLVQSEMF PLNTTARTLI ELGGFKGIII SGGPNSVFEP  60
   61 EAPSIDPEIF TCGLPVLGIC YGFQLMNKLN GGTVTREHIR EDGACEIQVD TSVHLFNGLH 120
  121 KTETVLLTHG DSVSEATVAP DFKVMAKSGH HVAGICNENR KLYGVQFHPE VDLTTNGTKM 180
  181 FENFLFKVVG CCGNFTIQNR EQSCISEINS IVGDKKVLVM VSGGVDSAVC AALLRRALGP 240
  241 NRVTAIHIDN GFMRHEESDA VEKSLAALDL PIHRYNFGTT FRSSTEHCKD GEVALDECDD 300
  301 PEMKRKIIGN TFIRVKDVIM KDLNINHDEY FLAQGTLRPD LIESASALAS GHADTIKTHH 360
  361 NDTFLVRELR KLGKVVEPLK DFHKDEVREL GKDLGLPESI VQRHPFPGPG LAIRILCASD 420
  421 KRPELMFNGP MYNGDVQGRI IDVTEQFLNS AINPSQGIYE HLQFEQARNN VLLSLSERDR 480
  481 QLAEQQTFQI SAHILPIKTV GVQGDARSYS YAVALSTEQR PIPWKLLFAY ASVIPKLFHG 540
  541 VNRVVYAFGS KIEFSIE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 135.0
Match: 1gpmA
Description: GMP synthetase; GMP synthetase, central domain; GMP synthetase C-terminal dimerisation domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
imidazoleglycerol-phosphate synthase activity 0.270391651600004 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [665-794]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DLTRTYLVPH IVTKLQMADH IANNILFGRV AASDGTQLPN VGHKIQQMPV VLLPVDFDRD  60
   61 RDMIGSYRHS IVLRPFVTSD FMTGQAAIPG VHLPEETLIE MDKAIRTNVL GISRVLLDMT 120
  121 CKPPGTTEWE 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 6.12
Match: 1gpmA
Description: GMP synthetase; GMP synthetase, central domain; GMP synthetase C-terminal dimerisation domain
Matching Structure (courtesy of the PDB):

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