| Protein: | gbh-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 409 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gbh-2.
| Description | E-value | Query Range |
Subject Range |
|
|
299.0 | [0..2] | [400..26] |
|
Region A: Residues: [1-119] |
1 11 21 31 41 51
| | | | | |
1 MIVQRRLVSG FTWVTGWNLK NIRSKNDCLE IRYENEGNPS KLIMPFVWLR DHCTSQKLYH 60
61 LPTNQRKSNC CDITSLSKIK HSNQVIIDEA TNSLQIVWID GHQSKFKIGN IIREGKVEK
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [120-409] |
1 11 21 31 41 51
| | | | | |
1 NVSNDNKIYE LWNSKSLKDV PRISKSTLSL QSFSKNLVKY GVIIVDGVEG TSEATEKLCQ 60
61 SLVPVHDTFF GQFWVFSNSA TNDEPAYEDT AYGSDEIGPH TDGTYFDQTP GIQVFHCLTP 120
121 AKTGGDTVLV DSFYCAEKLR NESPEDFEIL CNTKISHHYL EGSPPGSSIH SVSLEKPVIE 180
181 RNSFGNITQI RFNPYDRAPF SCLNSSEASA AETIKFYEAY EKFSKICHNP DNSIEISLRP 240
241 GSVIFIDNFR ILHSRTSFQG YRQMCGCYLS RDNFMAKAIP FLSGKSQTSL
|
| Detection Method: | |
| Confidence: | 54.522879 |
| Match: | 1gqwA |
| Description: | Taurine/alpha-ketoglutarate dioxygenase |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| damaged DNA binding | 2.1600632791412 | bayes_pls_golite062009 |
| oxidoreductase activity | 2.14660717798066 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.96457406152694 | bayes_pls_golite062009 |
| binding | 0.997838210709106 | bayes_pls_golite062009 |
| catalytic activity | 0.921320409505 | bayes_pls_golite062009 |
| nucleic acid binding | 0.195303464765705 | bayes_pls_golite062009 |
| DNA binding | 0.119653205743915 | bayes_pls_golite062009 |
| protein binding | 0.0481711987500598 | bayes_pls_golite062009 |
