| Protein: | pde-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 734 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pde-2.
| Description | E-value | Query Range |
Subject Range |
|
|
474.0 | [0..1] | [709..1] |
|
Region A: Residues: [1-100] |
1 11 21 31 41 51
| | | | | |
1 MLELRRNSSP SSAHPSPQTN CQNSQRGDGL HHHHHEAASG STCCGGMTVF TGANAAKSSN 60
61 EPAGSASPTV WRKTSHPPLH FNNNETRNRN LQMQLKNRGT
|
| Detection Method: |  |
| Confidence: | 0.955 |
| Match: | 2p06A |
| Description: | No description for 2p06A was found. |
| Term | Confidence | Notes |
| catalytic activity | 0.0826290321540933 | bayes_pls_golite062009 |
|
Region A: Residues: [101-340] |
1 11 21 31 41 51
| | | | | |
1 KDDWGASLRY DIEEPTSSGL LELLPDVPIV RKLSRPLVKM DDQDDACSVA SNESDRTVLS 60
61 PLVPMSIFDQ FLCLTNNLSA LISCIIAEAK KNTEAEDYAV FLHDEDNKQM VLFNNETMLM 120
121 TGKKFDMGYG IVGKVASTMR TMNIRDVSRC PFFNEEIDEQ FSIKARNLIA FPLIDSSCSL 180
181 IGVIVLYNKE NGFSRHDEKY IKRFSYFVAN SIAHAILAKQ IEEVRTRIHM VEEFKIQGED 240
241
|
| Detection Method: | |
| Confidence: | 22.0 |
| Match: | 1mc0A |
| Description: | 3',5'-cyclic nucleotide phosphodiesterase 2A, GAF A and GAF B domains |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [341-734] |
1 11 21 31 41 51
| | | | | |
1 AVIEEVDIMR LVNDPLRDWR YFSQNFADFS FPPRSVGENH FHRASMMFFE DLGFSMLYKL 60
61 NKRKLSYLVL RVSAGYRPVP YHNWSHAFAV THFCWLTLRT DAIRRALSDM ERLSLLIACL 120
121 CHDIDHRGTT NSFQMQSLQK TPLSVLYSTE GSVLERHHFA QTIKLLQQEE CSILENLPAA 180
181 DFRTIVNTIR EVILATDISA HLRKQERIKT MISEGYNPMS FDHRYLLMCL VMTASDLSDQ 240
241 AKNFHNAKRI AENIYLEFFA QGDLELQLGV KPLEMMDRTN AYVPTVQIDF LFKIGVPVFQ 300
301 LLASVVPEGR TTSEAIDANH LCWVALDEEV RNNPSATKYT RVFARRESRT EDIRSSAKAR 360
361 PKSCRNCFKT VRACICKRKC SSNTRYFGSS FRWI
|
| Detection Method: | |
| Confidence: | 71.30103 |
| Match: | 1z1lA |
| Description: | The Crystal Structure of the Phosphodiesterase 2A Catalytic Domain |
Matching Structure (courtesy of the PDB): |
|
