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View Structure Prediction Details

Protein: CE35671
Organism: Caenorhabditis elegans
Length: 670 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE35671.

Description E-value Query
Range
Subject
Range
gi|82716811, gi|... - gi|82736168|ref|ZP_00899028.1| Urocanase [Pseudomonas putida F1], gi|82716811|gb|EAP51865.1| Urocana...
1056.0 [0..77] [652..67]

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Predicted Domain #1
Region A:
Residues: [1-670]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNIPSLFVDP FSPLLEHPTE QRAKNVAHAP KRPCNLTQTE KMLAVRNALR YIPKEHHVLL  60
   61 ATEFAEELNT YGHIYGYRFM PNFDLFAPPV SEIGAHCEQA SAIILMILNN LDKRVAQFPQ 120
  121 ELVTYGGNGQ VFSNWIQFRL VLRYLYTMTD HQTLVLYSGH PLGLFPSTPD SPRMTVTNGM 180
  181 MIPSYSTKEL YDKYFALGVT QYGQMTAGSF CYIGPQGIVH GTTITVLNAG RRMGLDSLAG 240
  241 KVFVTAGLGG MSGAQPKAAK IAGCIGVIAE ISDTALLKRH QQGWLDVYSK DLEEIVNWIK 300
  301 EYREKKEAIS IGYLGNVVDL WERLAEEPEC LVELGSDQTS LHNPFLGGFY PAGLTFEQSN 360
  361 QMMTSDPVKF KKLVQNSLIR QIAAIDKIAA KGMYFWDYGN AFLLECQRAG ANLLREDAQD 420
  421 DKSFRYPSYM QDIMGDIFSM GFGPFRWVCT SGKPEDLRLT DQTACKIIDE LKDTDVPEYV 480
  481 KQQYLDNKKW IEEAEKNKLV VGSQARILYS DRAGRVALAS AFNELVKSGK VSAAIVISRD 540
  541 HHDVSGTDSP FRETSNVYDG SAFTADMAVQ NCIGDSFRGA TWVALHNGGG VGWGDVINGG 600
  601 FGIVLDGSSD AARRAEGMLN WDVPNGVTRR SWSGNAKAQE AIQRAEKQVD GLRVTLPVEA 660
  661 DEELLKKLKF 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1uwlA
Description: 1.76A Structure of Urocanate Hydratase from Pseudomonas putida
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
urocanate hydratase activity 6.17416351807693 bayes_pls_golite062009
catalytic activity 1.39967796334655 bayes_pls_golite062009
carbon-oxygen lyase activity 0.993793443059923 bayes_pls_golite062009
hydro-lyase activity 0.955420127498682 bayes_pls_golite062009
lyase activity 0.937502942170548 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle