YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE35517
Organism: Caenorhabditis elegans
Length: 671 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE35517.

Description E-value Query
Range
Subject
Range
gi|109043037 - gi|109043037|ref|XP_001096717.1| PREDICTED: similar to methylcrotonoyl-Coenzyme A carboxylase 1 (alp...
616.0 [0..17] [670..119]

Back

Predicted Domain #1
Region A:
Residues: [1-671]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGVFQKRCA STAPLIRPIQ RVLVANRGEI AIRVQNTARK MGIETVAVFS DADRNSLFVK  60
   61 KADKAYHIGP PLAAESYLNM DKIINSALRS GAQAIHPGYG FLSENAGFAE KCAQAGLVFI 120
  121 GPPAQAIRDM GAKNVSKQIM EDAKVPVVKG FHGEDQSDAN LKKKSAEIGY PVMLKAVYGG 180
  181 GGKGMRIAWN EAEFEEKLAS ARNEAKKSFG NDEMLVEKFV EKPRHVEVQV FGDHHGNYVH 240
  241 LWERDCSVQR RHQKIIEEAP APNMEHDTRV KLGESAVRAA AAVGYVGAGT VEFIMDPRGE 300
  301 FYFMEMNTRL QVEHPVSEAI TGTDLVEWQL RVAQGEKLPL KQSEIPLNGH AFECRVYAED 360
  361 TRKGAFMPTA GRLNYVDFPE DARIDTGVVS GDEVSIHYDP MIAKVVVWGQ DRAVAAAKLE 420
  421 SALARTRISG LPTNIDFVRR VLAHPEFAAG NVYTDFIPDH QKELFAESET PAEIYVESAV 480
  481 AHALAALQKS DAGVFQNLSF FRMNLSPKYI FKIDGKDVSI RFDSDSRLTV SYDGNSYETL 540
  541 LNDIESTTDG SFKFTLEANG RRWSTVVKNL GNSLMVNGVG QNEYETPQIH ETFDSLSGGA 600
  601 ASHSAVAPMP GIIEKILVKP GEQVTTGQAL VVMTAMKMEY IIRAPEDSTV EHIKCQAGKN 660
  661 VPKNAVLVQF A

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 147.0
Match: 2qf7A
Description: No description for 2qf7A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle