YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE35502
Organism: Caenorhabditis elegans
Length: 442 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE35502.

Description E-value Query
Range
Subject
Range
gi|210265 - gi|210265|gb|AAA42583.1| p66-src protein
gi|394713 - gi|394713|emb|CAA36156.1| src protein [Avian sarcoma virus]
SRC_AVIS2 - Tyrosine-protein kinase transforming protein Src OS=Avian sarcoma virus (strain PR2257) GN=V-SRC PE=...
307.0 [0..3] [438..140]

Back

Predicted Domain #1
Region A:
Residues: [1-442]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIDNYLLRYQ FFHGFVLQEL QLILLKTNGD FLLRLSHQPE KNAKKPTTPD KSATDPIPLT  60
   61 RVILVLSVNI TQKTGTTRSF YGDLEDVKKE NMDMHLFIEE TAGKWTSFYI ERRFKFPTID 120
  121 ELINYYKVNP ICYHNTRVFL KRPIVLQDWE LRAEGIDMTP KKLGEGAFGI VYLGRWAQPF 180
  181 SVDQKEFHKW CDVAVKTVKN DDSRAALLEV MHEARLQLQL RHKNVLAFRG VFLLKKPIML 240
  241 VSEFCENYLQ KSKVSVDEKL RFCLGSSCGL EYIHFKGLIH RDLATRNILV SADKTPKIAD 300
  301 FGLAKHASSY KMRKATKIPV RYLAPETLSS FVYSTKTDVY TFGLVIWEIF ANGQEPYMKA 360
  361 QPHQECVAPK NTQLRGRHIK ELIRKELFVK FNQEAPVALQ QYVAAKLFVV DDKKRPDMPE 420
  421 VSTFLGDMLK VDLTKMRYSY KM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 81.69897
Match: 2h8hA
Description: No description for 2h8hA was found.

Predicted functions:

Term Confidence Notes
protein kinase activity 4.80423821582894 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 4.62563910354252 bayes_pls_golite062009
kinase activity 4.49248003612191 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 4.22000749960953 bayes_pls_golite062009
protein serine/threonine kinase activity 3.79514095722095 bayes_pls_golite062009
transferase activity 3.46855149744418 bayes_pls_golite062009
catalytic activity 1.58699080719302 bayes_pls_golite062009
protein binding 1.5576335125602 bayes_pls_golite062009
ATP binding 1.52245797843186 bayes_pls_golite062009
adenyl ribonucleotide binding 1.49413620362406 bayes_pls_golite062009
adenyl nucleotide binding 1.4569583921893 bayes_pls_golite062009
binding 1.4090115174802 bayes_pls_golite062009
purine ribonucleotide binding 1.24912655063747 bayes_pls_golite062009
ribonucleotide binding 1.24864625022733 bayes_pls_golite062009
purine nucleotide binding 1.21461303193661 bayes_pls_golite062009
nucleotide binding 1.2042473055528 bayes_pls_golite062009
receptor signaling protein serine/threonine kinase activity 0.72813241420523 bayes_pls_golite062009
protein tyrosine kinase activity 0.65582668281291 bayes_pls_golite062009
receptor signaling protein activity 0.58533773607974 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle